Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02176 ATGGAGGACTACGATTTTGGAAACCCTAATTATTCTAACCCTAATTGCGCTCATTCTTTCGTGAATATGGCTACTCCCACCTCAGATTTCATGTTATCTGATTATCTATTGCTTGATGATGATGTTATTATTGATAATCATCATCAACATCAAGATCAAGACTCTTGGTCACAGAGTACTGAATCATCTTCGTTGGCAGCAGCATCAAGCAATGTCAATCACGAATTTGGTGGTGCAACAACCTCCAACCACAATAACAACATAAAATGCAAAACTTATGTGAGTAAGCGAAACAAGCAGGTAGAAGCGAGGCAAAGGGTGGTGTTCAGAACTAGATCGGAGCAAGAGGTCATGGATGATGGATTTAAATGGAGGAAGTATGGAAAGAAGCCAGTAAAGAACAGTCCCAATCCTAGGAACTATTACAAGTGCTCGAGTGTAGGATGCGGTGTGAAGAAAAGAGTGGAAAGGGATGCAGAAGACAGGAGCTATGTGTTAACAAGTTATGACGGTGTTCACAATCACCAAATCCCTTCTTCTAACTCCTACTACACTACTTCTCCATTCTCCATCTTTCATTCTAATGATATTAATTGGTCCCTCCATGCTCTTACTGCAAACTCATCATCCTCTAATTCCTAG 642 0.405 MEDYDFGNPNYSNPNCAHSFVNMATPTSDFMLSDYLLLDDDVIIDNHHQHQDQDSWSQSTESSSLAAASSNVNHEFGGATTSNHNNNIKCKTYVSKRNKQVEARQRVVFRTRSEQEVMDDGFKWRKYGKKPVKNSPNPRNYYKCSSVGCGVKKRVERDAEDRSYVLTSYDGVHNHQIPSSNSYYTTSPFSIFHSNDINWSLHALTANSSSSNS 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02176 213 ProSiteProfiles WRKY domain profile. 113 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst10g02176 213 SMART WRKY_cls 118 177 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst10g02176 213 MobiDBLite consensus disorder prediction 55 69 - -
Arst10g02176 213 Gene3D WRKY domain 105 171 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst10g02176 213 MobiDBLite consensus disorder prediction 49 69 - -
Arst10g02176 213 Pfam WRKY DNA -binding domain 119 176 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst10g02176 213 FunFam WRKY transcription factor 57 104 178 - -
Arst10g02176 213 SUPERFAMILY WRKY DNA-binding domain 110 178 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst10g02176 213 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 45 202 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02176 Arst-Chr10 75713128 75716111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02176 20 204 WRKY Transcription Factor Family AT5G64810 43.784 1.66e-38 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Arst10g02176 WRKY 5.1e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02176 - - gmx:100127396 178.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g02176 10 75713128 75716111 Arst10g02176 10 75713128 75716111 ECH
Arst6g03636 6 104425057 104431165 Arst10g02176 10 75713128 75716111 PCT