Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Arst10g02165 | ATGGAGTTGGCCGCCAAGCTCCACCACCTCGATCTCACTTCCGCCTTTCTCAGCGGTGGCTCCGTCATCTTCGAACCTCCTAAACCTCTCTCCCGCCCACCCTTTCATCTTCGCCCAGTTCGCATCAACAACACTCACTTCACTAACCCAACAACAACAAGAAGAAGAAGATTCTTCGACGCCATAAGACCTACCAATTCCACTACCACTCTCCGTTTCTCCGCCGTGGCCACCGACGACACCTCCCTCGCCGAAACGACGACCGAACAACAAGACGACATCGAGTCCCTCCTCTCCGAACCTTCTTCCAACGACTATGACTTCGATAAACGGCGCGCCAACAAGCAATCCACTACGGGAGCTTCCAGCGTTTCTTCGGGGGTAAAATTGGAAAACGTTACCAAGAGCTACAAGGGTGTAACCGTTTTGAAAGACGTGAGCTGGGAAGTGAAGAAGGGAGAGAAAGTGGGCCTCGTTGGCGTTAACGGTGCCGGTAAAACCACACAGATGAGGATTATTGCGGGTCAAGAAGAACCTGATTCAGGTAACGTCATTAAAGCCAAACCGAACATGAAGATCGCATTTTTGAGCCAGGAATTCGAGGTTTCGCCCAGTAAGACGGTGAGGGAAGAGTTCACGAGCGCGTTCAAGGAGGAGATGGAGATAGCGGTGAAGCTTGACAAGGTTCAGAAGGCTCTAGAAGGTGCCGTGAATGACATGGATTTGATGGGGAGGCTTCTTGATGAGTTTGATTTGCTTCAGAGAAAGGCACAGGCTTTGGATTTGGATGAGGTTGATGCCAAGATAAGTAAGTTGATGCCTGAGCTTGGGTTTGCAGCTGAAGATTCTGATAGGTTGGTTGCTTCTTTTAGCAGTGGGTGGCAGATGAGAATGTCTCTTGGGAAAATTTTACTTCAGGAGCCAGATTTGTTGTTGTTGGATGAGCCGACGAATCACCTTGACCTTGATACCATTGAGTGGCTCGAAGAGTATCTTAACAAGCAGGATGTCCCCATGGTTATCATTTCCCATGACAGAGCATTTCTTGATCAGCTGTGCACAAAAATTGTGGAAACTGACATGGGTGTATCCAGGACATTTGAGGGGAATTATTCTCAGTTTATACTTTCAAAGGCAGCATGGATTGAGGCACAGTACGCCGCATGGGAAAAGCAGCAGAAAGAAATTGAGCTGACCAAAGATTTAATTAGTAGGTTAGGTGCTGGAGCAAATTCTGGCCGTGCTTCATCTGCCGAGAAGAAGCTGGAGAGACTTCAGGATGAGGAACTAGTAGAGAAGCCATTTGAACGGAAACAAATGAAAATCAGGTTCCCTGAGCGCGGAAGGAGTGGAAGATCTGTTGTAACAATTAAGAACTTGGAGTTTGCCTTTGAGGATAAGACACTTTTCAAGAAGGCAAATCTTACAATTGAAAGGGGAGAAAAGATTGCAATTATTGGTCCAAATGGATGTGGCAAGAGTACTTTATTGAAATTGATAATGGGTATAGAGAAGCCGATGGGGGGTGAGGTTGTGCTTGGGGAGCATAATGTATTACCTAACTATTTCGAGCAAAACCAGGCTGAGGCACTGGATCTGGACAAGACAGTGCTTCAGACGGTAGAAGAAGCTGCAGAGGACTGGAAGATTGATGATATCAAAGGACTTCTTGGGCGATGTAATTTTAAAGCTGATATGCTTGACCGAAAAGTTTCTCTATTGAGTGGTGGTGAGAAGGCACGGTTGGCTTTTTGCAAATTCATGGTAAAGCCATCAACTCTACTTGTGTTGGATGAACCAACCAATCACTTGGATATACCTTCTAAAGAAATGCTCGAGGAAGCAATAAATGAGTACGAGGGCACTGTTATCACTGTGTCTCATGATCGATACTTTATAAAACAAATAGTTAATAGAGTGATAGAAGTTAAAGATGGCACCTTACAGGATTATGCAGGCGATTACAATTATTATTTAGAGAAGAACCTTGACGCCAGGGAGAGAGAGCTCGAACGGGAAGCAGAGCTTGAGGACAAAGCTCCTAAGGTGAAAGCCAAGTCTAAGATGTCTAAGGCTGAGAAAGAAGCACGGAAAAAACAAAAGATGCAAGCCTTTCAGGCAGCAAAACAGAAGTCTAAAAGCGCCAAGAATGCCAAGAGGTGGAAGTGA | 2169 | 0.4583 | MELAAKLHHLDLTSAFLSGGSVIFEPPKPLSRPPFHLRPVRINNTHFTNPTTTRRRRFFDAIRPTNSTTTLRFSAVATDDTSLAETTTEQQDDIESLLSEPSSNDYDFDKRRANKQSTTGASSVSSGVKLENVTKSYKGVTVLKDVSWEVKKGEKVGLVGVNGAGKTTQMRIIAGQEEPDSGNVIKAKPNMKIAFLSQEFEVSPSKTVREEFTSAFKEEMEIAVKLDKVQKALEGAVNDMDLMGRLLDEFDLLQRKAQALDLDEVDAKISKLMPELGFAAEDSDRLVASFSSGWQMRMSLGKILLQEPDLLLLDEPTNHLDLDTIEWLEEYLNKQDVPMVIISHDRAFLDQLCTKIVETDMGVSRTFEGNYSQFILSKAAWIEAQYAAWEKQQKEIELTKDLISRLGAGANSGRASSAEKKLERLQDEELVEKPFERKQMKIRFPERGRSGRSVVTIKNLEFAFEDKTLFKKANLTIERGEKIAIIGPNGCGKSTLLKLIMGIEKPMGGEVVLGEHNVLPNYFEQNQAEALDLDKTVLQTVEEAAEDWKIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAINEYEGTVITVSHDRYFIKQIVNRVIEVKDGTLQDYAGDYNYYLEKNLDARERELEREAELEDKAPKVKAKSKMSKAEKEARKKQKMQAFQAAKQKSKSAKNAKRWK | 722 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Arst10g02165 | 722 | Pfam | ABC transporter | 143 | 318 | IPR003439 | GO:0005524 | |
Arst10g02165 | 722 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 434 | 660 | IPR027417 | - | |
Arst10g02165 | 722 | MobiDBLite | consensus disorder prediction | 80 | 103 | - | - | |
Arst10g02165 | 722 | FunFam | ABC transporter ATP-binding protein | 415 | 685 | - | - | |
Arst10g02165 | 722 | SMART | AAA_5 | 479 | 647 | IPR003593 | GO:0016887 | |
Arst10g02165 | 722 | SMART | AAA_5 | 152 | 367 | IPR003593 | GO:0016887 | |
Arst10g02165 | 722 | MobiDBLite | consensus disorder prediction | 672 | 722 | - | - | |
Arst10g02165 | 722 | ProSitePatterns | ABC transporters family signature. | 290 | 304 | IPR017871 | GO:0005524|GO:0016887 | |
Arst10g02165 | 722 | PANTHER | ABC TRANSPORTER ATP-BINDING SUBUNIT | 127 | 716 | - | - | |
Arst10g02165 | 722 | MobiDBLite | consensus disorder prediction | 672 | 702 | - | - | |
Arst10g02165 | 722 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 455 | 670 | IPR003439 | GO:0005524 | |
Arst10g02165 | 722 | CDD | ABCF_EF-3 | 128 | 358 | - | - | |
Arst10g02165 | 722 | Gene3D | - | 417 | 684 | IPR027417 | - | |
Arst10g02165 | 722 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 129 | 363 | IPR027417 | - | |
Arst10g02165 | 722 | ProSitePatterns | ABC transporters family signature. | 574 | 588 | IPR017871 | GO:0005524|GO:0016887 | |
Arst10g02165 | 722 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 128 | 386 | IPR003439 | GO:0005524 | |
Arst10g02165 | 722 | Pfam | ABC transporter | 471 | 602 | IPR003439 | GO:0005524 | |
Arst10g02165 | 722 | FunFam | Putative ABC transporter ATP-binding component | 129 | 413 | - | - | |
Arst10g02165 | 722 | Gene3D | - | 124 | 409 | IPR027417 | - | |
Arst10g02165 | 722 | Coils | Coil | 682 | 711 | - | - | |
Arst10g02165 | 722 | Pfam | ABC transporter | 357 | 444 | IPR032781 | - | |
Arst10g02165 | 722 | CDD | ABCF_EF-3 | 455 | 647 | - | - | |
Arst10g02165 | 722 | MobiDBLite | consensus disorder prediction | 80 | 126 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Arst10g02165 | Arst-Chr10 | 75440913 | 75445119 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Arst10g02165 | 452 | 672 | Calmodulin-binding Proteins | AT2G36910 | 25.101 | 7.67e-13 | 70.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Arst10g02165 | - | - | adu:107470294 | 1298.49 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Arst10g02165 | 10 | 75440913 | 75445119 | Arst10g02165 | 10 | 75440913 | 75445119 | ECH |