Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02090 ATGAATACTTGTTTTCATTCCCTGGATAACATAACACCCTGGAGAGATGACTGGAGAATAAGAGTCAGGATTAACAGGGTATGGTCTGCTTCATATGGTGCTCGAACAAGAGATGACAATCTGATACACATGGTGTTAATGGATGATAAGTTAACAAAAATTGAAGCAACTATCACACAGTCTCTAATTCCATATTTTAATGAAGTTCTAGAAGAAGGTGATGTTTATGTGATTGCACATTTTACTGTGGTTCCAAACTCTGGGTTAACTAGGTTGACAAAGCACCGCTTTAGGATTATTTTCCATAGCAAAACAATTGTTGTACCAACCATGTCTATTGGTATGCCCAATGCTGCATTTAAGTTTACTTCAATCGATGAAGTAGTTGAGAAGAGATGTAATGAAGATTTCTTGATAGATTTCATTGGGTTCATAGTTGGCGTACGTCAAGAAGCTGATATTGGTTCAGATGGGGAAAGAATGAAAGTTATAATCTTGGAAGTTGTTTCAGACGGGAAGAAGAAGATACAGTGTAATCTTATTGAAAGATCGTGTGAGGTATTTGATTTGTCTATGTTAAGAAAATATCAAAGACCACCAGTTGTGGTGCTAGAGGCTTTCAAGATTAAAGTCTTTGGAGATTATGTGTGCCTGCAAAATGTGATTAATATTTCTACAGTTCTTATAAATCCTGATATATACGAAAGTGTGGAGTTTCTTAGCAGATTTAATGTTGCATGTTACGAGTTTTCAATATTTATTCCCATTGTATCTGGTTATCTAATAGCCAGTGTTGGTGATGATTCCGTTGACTGGAGAGCTATTCGGTCTATTGATCAACTAAAGAAAAACTGTCAGGATGGAATTTTCTATGTTATGGGAACAATTACAGAGGTTGTTGATGATTCAAATTGGTGGTACCATTCCTGTGTTTGTGGAAATGCTGTTGTTGCCGATGATAATAGTTATCATTGTGATATTTGTGACTCATGTGTGGAGCATGTGGTTTTAAAGTATAGAATAACTGTCATTGTTGATGATGGAACATCATCTGCAGCATTCGCACTTGTTGATAATGCTGCAACAAAGTTATTTGGGAAAACCTGTGCTGAAGCTTTCTTGCATATGGAGAAAGAATTACACCTAGATTGGAGTGATATTTCAAGGGTTGATCAATCTAGCAGGGTTCCCCTATTCCATCGAATTATTGGAACTAAGATAGTGTTCAAAGTTAAGATGCACAGTGTTTTCGGACCACATTATTCTGATCAATTCAAAGTTGTTAACCTCTTTGGTGATGTAGCTGAACCATGTTTGCCTGTTCAAAGTCTTAATGAATCACTGAAAATCCTTGTTGGCACTATTTCGTATGTCTTTGAGGATCATGAGTGGTGGTTAGCGACTTGTTTATGTGGTTCAGCTGTTTCGGTTGTGAATGGTTCACCCTATTGTGTAATGTGCCAAATTGACTGTGTTGACACTATACCAAAGTACTCATTGAAGGTAATCGTGTCTTATAGAACTAGAAATAATATCTTAGTCCTTGGAGATTCTTTGGTTGCACGAATTTTGATGAAAAAATGTGCAACTCTGCTGGAAGAAAATCCAATTTCAGGACAGACTTTGGACAAGAAGATTGTTCCACAGGATATTATTTCTCATCTAATCGAAAAAAAATTTGCATTCATTGTTGATCCCAGGATTGTTGGATATGAGCTGAACATGGGTGTTTATATTGTAAGAGATTTCACAGATGAAAGTTGTATTGTTACTCTTTTGGAAAGTGTTACTCAGATAACTGATTAA 1806 0.3621 MNTCFHSLDNITPWRDDWRIRVRINRVWSASYGARTRDDNLIHMVLMDDKLTKIEATITQSLIPYFNEVLEEGDVYVIAHFTVVPNSGLTRLTKHRFRIIFHSKTIVVPTMSIGMPNAAFKFTSIDEVVEKRCNEDFLIDFIGFIVGVRQEADIGSDGERMKVIILEVVSDGKKKIQCNLIERSCEVFDLSMLRKYQRPPVVVLEAFKIKVFGDYVCLQNVINISTVLINPDIYESVEFLSRFNVACYEFSIFIPIVSGYLIASVGDDSVDWRAIRSIDQLKKNCQDGIFYVMGTITEVVDDSNWWYHSCVCGNAVVADDNSYHCDICDSCVEHVVLKYRITVIVDDGTSSAAFALVDNAATKLFGKTCAEAFLHMEKELHLDWSDISRVDQSSRVPLFHRIIGTKIVFKVKMHSVFGPHYSDQFKVVNLFGDVAEPCLPVQSLNESLKILVGTISYVFEDHEWWLATCLCGSAVSVVNGSPYCVMCQIDCVDTIPKYSLKVIVSYRTRNNILVLGDSLVARILMKKCATLLEENPISGQTLDKKIVPQDIISHLIEKKFAFIVDPRIVGYELNMGVYIVRDFTDESCIVTLLESVTQITD 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02090 601 SUPERFAMILY Nucleic acid-binding proteins 120 246 IPR012340 -
Arst10g02090 601 Gene3D - 440 586 IPR012340 -
Arst10g02090 601 Gene3D - 264 437 IPR012340 -
Arst10g02090 601 SUPERFAMILY Nucleic acid-binding proteins 445 564 IPR012340 -
Arst10g02090 601 SUPERFAMILY Nucleic acid-binding proteins 283 413 IPR012340 -
Arst10g02090 601 Gene3D - 114 250 IPR012340 -
Arst10g02090 601 CDD RPA1_DBD_A_like 19 107 - -
Arst10g02090 601 Gene3D - 5 111 IPR012340 -
Arst10g02090 601 CDD RPA1_DBD_B_like 140 243 - -
Arst10g02090 601 SUPERFAMILY Nucleic acid-binding proteins 5 113 IPR012340 -
Arst10g02090 601 Pfam Domain of unknown function DUF223 44 138 IPR003871 -
Arst10g02090 601 Pfam Replication factor-A C terminal domain 290 378 IPR013955 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02090 Arst-Chr10 70709700 70713153 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02090 1 369 Core DNA Replication Machinery Family AT5G08020 23.560 5.90e-17 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02090 - - adu:107470183 1216.83