Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02089 ATGAACCATTGCATTGTTCCTCTCAAAAAAATCACTCCATGGAAACATGATTGGAGTATTCGAGTAAAGATTATACGGCTGTGGAAAGAAACAGCTGTAGTTGAGGGATCAAAACAAGAATTATTACAGTTGATTTTGATGGATGAACATTTGGAGAAAGTTCAGGCAACTGTTAAGCATCCTGATGTAGCTATCTTTTCGGGTGTTCTAAAAGAAAGAAATATCTATGAATTTTCTAATTTCATTGTCGTCCCTAACTTAGGAGCATTGAGAGTTACTAAACATAAGTTCCAGATTATTTTCAATGAGGATACATCTGTCATCAATAGTCCAGATCCTATTATATCCTCATCTGGTTTAGAACTCTCCTGCATTGATGAAATACTAGGGAGGAAAGTTGATTATGATTATTTAGTAGATTTCATTGGAATTCTTTGTGACCTAAGAAGAGGGGATGATATAGATTTTAATGGAAAAAGCTTCACTGTTATGATCCTTCAGCTATATGCTAATGGCAAAAAAATCCAGTGTAATATTATTGGAGAGTTTTTCCCGGTGTTGGATATAACTCTCTTAACCAAGTTTCAGAGAGCACCTGTAATTGTTTTGCAATCTTTTAAGGTCAAAGTGAAAACAGATAAAGTTATTTTACAGAATGTTTTGAATGTATCCACGGTTTCTGTCAATCCCGATTTAGAAGAGTCCGTTGACTTCCTTAGTCAATTCAGTATTGCAAAATGCCACTTCTCAAGATTGATTCATGCTGACTCAAGAGGTTTATATTGGAAGATTGATGATGAAACTTTTGACTGGAGGCTCATGAGAACCATTGCTAATCTAAAATCTAATGAGGAGGATGGGCAATTCTTTGTATTGGGAAAAATTACGAGTGTTGTTGATGATCCTGAGTGGTGGTACTTCTGTTGTATTTGTGGTCATCCAATTGTAGGAAATGACAATGTTTTCCGTTGTCACTTGTGCAATCGGGAGTCTGAACACGTTATTGTCAAGTATAGGGTTAAAGTTATAGTGGAAGATGGTACCTCTACTGCGATGTTTGTGTTGTTGGATACTCCAGTGACTAAATTACTTGGAAAGACTTGTTCTGAGGCATTCTTGGTCAAAGAAAACAATCATGAGGGAATCCAGTTTTTGTACTGCCCTACTTTGTTCCAACATCTTGTTGGCATGAAAACAGTTTTTCAGATTCAGACCAAGAGAGTTAACAATAAAGGTTATTGTGGTACATTTAAGGTTATCAATGTTCTTGGCGATCCACCTTTTTTTGAAAAAGCTGAGGTAGAAAAGTCTGATAATGTATGTAGACATCCTATTTAA 1338 0.358 MNHCIVPLKKITPWKHDWSIRVKIIRLWKETAVVEGSKQELLQLILMDEHLEKVQATVKHPDVAIFSGVLKERNIYEFSNFIVVPNLGALRVTKHKFQIIFNEDTSVINSPDPIISSSGLELSCIDEILGRKVDYDYLVDFIGILCDLRRGDDIDFNGKSFTVMILQLYANGKKIQCNIIGEFFPVLDITLLTKFQRAPVIVLQSFKVKVKTDKVILQNVLNVSTVSVNPDLEESVDFLSQFSIAKCHFSRLIHADSRGLYWKIDDETFDWRLMRTIANLKSNEEDGQFFVLGKITSVVDDPEWWYFCCICGHPIVGNDNVFRCHLCNRESEHVIVKYRVKVIVEDGTSTAMFVLLDTPVTKLLGKTCSEAFLVKENNHEGIQFLYCPTLFQHLVGMKTVFQIQTKRVNNKGYCGTFKVINVLGDPPFFEKAEVEKSDNVCRHPI 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02089 445 Pfam Replication factor-A C terminal domain 292 406 IPR013955 -
Arst10g02089 445 SUPERFAMILY Nucleic acid-binding proteins 5 113 IPR012340 -
Arst10g02089 445 CDD RPA1_DBD_A_like 19 107 - -
Arst10g02089 445 Pfam Domain of unknown function DUF223 44 134 IPR003871 -
Arst10g02089 445 SUPERFAMILY Nucleic acid-binding proteins 279 407 IPR012340 -
Arst10g02089 445 Gene3D - 266 423 IPR012340 -
Arst10g02089 445 Gene3D - 4 112 IPR012340 -
Arst10g02089 445 SUPERFAMILY Nucleic acid-binding proteins 125 245 IPR012340 -
Arst10g02089 445 Gene3D - 121 245 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02089 Arst-Chr10 70698551 70700969 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02089 1 384 Core DNA Replication Machinery Family AT5G08020 21.394 1.92e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02089 - - adu:127742972 910.212