Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02088 ATGTCCTCCGAAGACATAGGTCTCGTACCCGACCAGAGGATCGAAACTGGTCTCAGCTCCTCACTCGTTTTTCAAGACGAAACCTTGCGCTTCAGCTGCGGGGGCCCGCAGCGTCGGGTCGGGGACCCGGGCCCGAAGACCCGGGATCTTGGTGGGTTCATCGATGACAAGATGTTCTCCATGGAGCGCGACCGGTACTTCGCCGCACAGGGCTCTGAGTTCCGCCGGAGCGTCTACGGCGACTGCTCCGGCCGCCGTGATCCGCCGGGAGCACGCAATTGGAGTAGGAATGGTGGCGCCAACACTCCAAGCGGCGACGAATCCGACGGGGATGATGACGAAGATGATGACGAGGATGACGATGACGACGATGATGTCGAAGGTGATGAAGGGCTTGTTGGTGTTGGTGATGGAAGCAAGCGCAATTCCAATCCGATTCTTGACATTAACGGTAGCAACGGTAGCAACGGTGGTGGCGGTGGTAGTTTGGGTGGTGTTACTGCTGCAGAGCGGATGGCAAATGGGAAAGGACAGCATCATTCGTCTTATGTTTCTACTAGAGAAATGTTGGGGAAGGATGGTGATATGGGGCAGCTGGTGCATAACAATGCGAGTGGTACTGATGAAGATCATCATCAGAGAGAGAGATTGGGTAAATCACAGAGTGCTGTAACCATTGCTGAAACTGATTGTGATGAGTACTATTCACATTATCTTCATGGCACGGAAGGATCGGGTTCTGTGCAGAAAGTTATGGTGGATGAGAATGGTTGTGGGTTTAGTGGAAGAAAGGACGTTCTGTTTTCAAGCGAGTCAGGGGAGTCGTTGAGGGCAATTCTTTCTGATCCTGTTACAGGTGCACTTATGGACGATGCCATGATATTACCTTGTGGGCATTCATTTGGTGGAGGTGGAATACAGCATGTTATTAGAATGAAAGCTTGCTGCACCTGTTCTCAACCCACGTCCGAGGAATCAATATCTCAAAACCTATCACTTCGAGCTGCTGTGCAGGCATATCGGCGTGAAGAGGAGTCACAATTTTACCGGTCATCTAAAAGACGAAGAGAGAGATTTGATCAGGGTGGTTTTGGAGATTCAGCTGTTGTAGAACCACCAAGGGGGAGAGGTGTTCAATTTCCTTTTGCTGTGATGGACCGTGTTATCATAAAGGGAAACAAGAGGACACCGCAACGCTTTGTTGGGCGTGAAGCTATTGTAACAACACAATGCCTTAATGGATGGTATGTGGTGAAGACACTGGACAATGCAGAGAGTGTGAAATTACAGTATCGGTCCCTTGCTAAGGTTTTGGATGATTCTTCAAAACCTTCCTCCACCAAGATGCCACCTAATTGGCGTTAG 1365 0.5011 MSSEDIGLVPDQRIETGLSSSLVFQDETLRFSCGGPQRRVGDPGPKTRDLGGFIDDKMFSMERDRYFAAQGSEFRRSVYGDCSGRRDPPGARNWSRNGGANTPSGDESDGDDDEDDDEDDDDDDDVEGDEGLVGVGDGSKRNSNPILDINGSNGSNGGGGGSLGGVTAAERMANGKGQHHSSYVSTREMLGKDGDMGQLVHNNASGTDEDHHQRERLGKSQSAVTIAETDCDEYYSHYLHGTEGSGSVQKVMVDENGCGFSGRKDVLFSSESGESLRAILSDPVTGALMDDAMILPCGHSFGGGGIQHVIRMKACCTCSQPTSEESISQNLSLRAAVQAYRREEESQFYRSSKRRRERFDQGGFGDSAVVEPPRGRGVQFPFAVMDRVIIKGNKRTPQRFVGREAIVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVLDDSSKPSSTKMPPNWR 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02088 454 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 9 448 - -
Arst10g02088 454 MobiDBLite consensus disorder prediction 143 160 - -
Arst10g02088 454 MobiDBLite consensus disorder prediction 193 222 - -
Arst10g02088 454 SUPERFAMILY RING/U-box 274 346 - -
Arst10g02088 454 ProSiteProfiles U-box domain profile. 275 347 IPR003613 GO:0004842|GO:0016567
Arst10g02088 454 MobiDBLite consensus disorder prediction 32 53 - -
Arst10g02088 454 MobiDBLite consensus disorder prediction 78 167 - -
Arst10g02088 454 MobiDBLite consensus disorder prediction 106 131 - -
Arst10g02088 454 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 275 345 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02088 Arst-Chr10 70645981 70649590 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02088 220 453 Plant U-box Gene Family AT5G05230 59.751 2.68e-87 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02088 - - pcin:129302449 598.971