Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02077 ATGGCTTCTACTGGTTCATCTTCTTCCTCATGGTCTTCTTCAAATTGGGTCATGGAAAATGCTGCTACCCCACATGTTCTTGCTGTTGATGATAACCTCATTGATCGCAAGCTCGTTGAGAAGCTCCTTAGGAACTCTTCTTGCAAAGTTACAACTGCAGAAAATGGGCCAAGGGCATTGGAGTTCTTGGGCTTGACCGATAGTGAGCAGAACGCCATGAATGGAAGGTCCAAAGTTAATTTGGTTATCACAGACTATTGCATGCCAGGGATGACAGGCTATGAGCTACTTAAGAAAATCAAGGAATCATCTAGCATGAAGGAGGTTCCGGTAGTGATCATGTCATCGGAGAACATACCAACACGGATTAACCAGTGTTTGGAAGAAGGAGCTCAAATGTTCATGTTAAAGCCCCTCAAACAATCTGATGTGAAAAAACTGACATGTCAGTTAATGAATTAG 462 0.4286 MASTGSSSSSWSSSNWVMENAATPHVLAVDDNLIDRKLVEKLLRNSSCKVTTAENGPRALEFLGLTDSEQNAMNGRSKVNLVITDYCMPGMTGYELLKKIKESSSMKEVPVVIMSSENIPTRINQCLEEGAQMFMLKPLKQSDVKKLTCQLMN 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02077 153 Gene3D - 20 153 - -
Arst10g02077 153 FunFam Two-component response regulator ORR5 24 153 - -
Arst10g02077 153 SUPERFAMILY CheY-like 24 151 IPR011006 -
Arst10g02077 153 CDD REC_typeA_ARR 26 147 - -
Arst10g02077 153 SMART REC_2 24 148 IPR001789 GO:0000160
Arst10g02077 153 ProSiteProfiles Response regulatory domain profile. 25 152 IPR001789 GO:0000160
Arst10g02077 153 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 151 IPR045279 GO:0009736
Arst10g02077 153 Pfam Response regulator receiver domain 26 146 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02077 Arst-Chr10 70200978 70202964 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02077 5 153 Response Regulator Gene Family AT3G56380 70.199 1.46e-67 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Arst10g02077 Response_reg 1.4e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02077 K14492 - gmx:100499827 256.529