Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02061 ATGGCTCCAAGCAGACCACAAAAAGTAGTGCAAATGGTGGAACCTGTAGAAGATGATGGTGGTGGTGATGGTGTTGATGATTTGAAGAAGAATGTTGTGAGAGCCTTGCCATTTTTCAAATTATTGAGCTATGCTGACGTAATAGATTGGATTCTGATGAGTCTGGGAATGGTGGGTTCGATTGTGCATGGAATGGCTCTTCCTGTTGGATACCTCTTGTTAGGAAAAGCTCTTAATGCTTTTGGCAACAATATTCATGACCAAGATGCCATGGTTAAAGCTCTTAAACAGGTTGTTCCGTACGTGTGGTACATGGCCATCGCCACATTCCCTGCTGGGATACTTGAGATTGGATGTTGGATGTATACAAGCGAAAGGCAGTTATCACGCCTAAGAATAGCATATCTAAAAGCAGTGCTTAGTCAAGAGATAGGAGCATTTGATACAGAGCTAACAAGTGGAAAAGTCATTAGTGGAATAAGCAAACACATGAGTGTCATACAAGATGCCATTGGTGAGAAGTTGGGTCACTTTACCTCAAGCTGTTCAACATTCTTTTCCGGAATTGTGATTGCTGCCATATGCTGTTGGGAAGTGTCACTCTTGTGTTTAGTGGTTGTACCGCTTATTCTTATGATTGGAGCAACTTACACCAAGAAAATGAACACCATTTCAACGACCAAAATGTTTTTCCATTCTGAAGCTACAGCTATGATAGAGCAGACAATATCACACATAAAAACAGTATATGCTTTTGTGGGAGAGAGTTCTGCAATGAAATCCTTCAGAGAGAATATGGAGAAACAGTTCCAAATAAGCAAAGGGGAGGCGCTTGTGAAGGGAGTTGGAACAGGGATGTTTCAAACCGTAAGTTTCTGTTCCTGGGCTCTCATTGTATGGGTTGGAGCCGTTGTCGTGACAGCCGGTAGAGCGAAGGGAGGAAACATTATAGCTGCAGTGATGAGCATCCTCTTTGGTGCCATATCCATCACTTACGCGGCACCAGACATGCAAATATTCAACCAGGCAAAAGCAGCAGGATATGAAGTTTTCCAAGTGATACAAAGAAAGCCTTTAATAAGCAATGAAGCACAAGGGAGGAAGGTTACCGAGATCACAGGTGACATTGAGCTGAGGGATGTATACTTTACCTACCCATCTCGACCGGAGAAACCTATCCTTCAAGGACTATCCTTGTCAATTCCAGCAGGAAGGACAGTAGCTCTAGTTGGTAGCAGTGGTTGTGGAAAAAGCACTGTTATTTCCCTGGTTAACAGATTCTATGACCCTGCTAGAGGAGAAGTTTTTATTGATGGTCACAATATCAAGGATCTTGATCTGAAGTTCCTTCGGAGTAATATAGGGCTCGTTTCCCAAGAACCGTCACTCTTTGCAGGCACCATCAAGGATAACTTGAAAGTGGGGAAAATGGATGCAGATGATCAAGAGATACAGAAGGCAGCTGAAATGTCAAATGCACACACTTTTGTATCTCAGCTGCCGAATCAATACTTAACAGAGGTAGGACAAAGGGGAGTTCAATTATCAGGAGGCCAGAAACAGAGAATTGCAATAGCAAGAGCCATTCTTAAGAATCCTCCCATCCTTTTGCTTGATGAGGCAACTAGCGCCCTTGACACCGAGTCAGAAAAGCTGGTTCAAGAAGCACTTGAAACAGCCATGCAGGGAAGGACTGTCTTCTTGATTGCACACAGACTCTCAACAGTTGTAAACGCAGATATGATTGCTGTAGTAGAGAACGGACAAGTTGTAGAAACAGGCACACACCAGAATTTGCTCGACAAAAGCGATTTCTATAGGGCATTATATAGCATGCAGAACCTTGAAGCAGCTCCTGAATCCAGCACCACAATTTCCAAAAGCAAGAGTACACACCAAGGAGATTCTACTGATGAAGCTAAACTCTCAGAGAAGCAGAGAGAGACTCAAATAAATCCCATGGAGGATTCTGAGCTAAAGGGACAAGAGACAAGAAAAAGAAATATATTTTTCAGAATCTGGTTTGGTCTGAAACCGAGGGAGATGGCAAAGATTGCTTTTGGCTCAGCTGCAGCAGCTTTCTCTGGTGTGTCGAAGCCAGTTTTCGGGTACTGCATCATCACTATTGGAGTTGCATACTTCGATCCTGATGCAAAAAGGAAGGTTGGCTATTATTCAGCCTTCTTCTCTGCAATAGGGCTGCTTTCATTACTCAGTAACACAATCCAGCATTACTTCTATGGAGTAGTTGGAGAAAAGGCCATGGCGAATTTCAGACATGCTCTATATAAAGGTGTGCTCCGTAACGAAGTAGGCTGGTTTGATAGATCTGATAACACGGTTGGTTCATTAACTTCGCGAATCATCAGTGACACTGCCCTGGTCAAAATCATAATTGCTGATCGGATGGCTGTGATTGTGCAATGCATTTCCTCCATATTGATAGCAACAGGTGTGAGCATGTATGTCGACTGGAGAATGGCTTTGGTAGCTTGGGCTGTGATGCCTTGCCACTTCATTGGCGGTCTCATTCAAGCAAAGTCTGCCAAAGGCTTTTCAGGTGACTATGCTGCTTCACATTCTGAGCTTGTTGCTCTTGCATCTGAGTCTGCAGCCAACATAAGGACTATAGCGTCATTTTGCCATGAAGAACATGTAATCATGAAAGCAAAGACATCTCAGGAAATTCCAATGAGAAAGTACCGGAATGAAAGTATCAAATACGGGATCGTTCAAGGCTTCTCCCTTTGCTTGTGGAACATTGCACATGCTGTTGCTCTGTGGTATACAACAATTCTAGTTGAAAGACGTCAAGCCACCTTTAAAAATGGAATACGAGCATACCAAATCTTTTCTCTCACTGTTCCCTCTATCACAGAATTATATACACTGATCCCAACTGTCATCTCAGCTATCAATGTACTAACCCCAGCATTCCAAACGCTTGATCGGAAAACCGAAATCGAACCAGATACACAGGATGATTCCCAACCGGAGAGGATCCTAGGAGAAGTTAAATTTGAACATGTAAAATTCAACTACCCTTCAAGACCTGCAGTCACTGTTCTGGACAACTTCAGTTTACAAATTGAAGCTGGATCAAAGGTGGCTTTTGTAGGACCAAGTGGTGCAGGAAAATCCTCTGTTTTGGCCCTTATACTAAGATTTTATGATCCAGGGGCAGGAATGGTATCAATCGATGGGAGAGATATACGGGGATATAATCTAAGATGGCTGAGGACTCAAATAGGGCTAGTACAACAAGAACCACTTCTTTTTAACTGCTCTATAAGAGACAACATTTGCTATGGACACAATGGGGCTTCTGAAAGTGAAATAGTGGAGGTTGCCAGAGAAGCAAACATACATGAATTTGTAAGTAATCTACCAGATGGATATAACACGGTTGTTGGGGAAAAAGGGTGCCAGCTTTCAGGAGGTCAAAAGCAAAGAATAGCCATTGCCAGAACCTTGCTAAAGAAGCCTGCAATTTTACTCCTAGATGAAGCAACAAGTGCTCTTGATGCTGAGTCGGAAAGAACTATTGTGAGCGCTTTAAAAGCAATAAATCTCAAGGAGGATAGTGGCTTGTGTTCAAGGACTACCCAGATTACGGTAGCTCACAGGCTTTCCACAGTAATAAATTCGGATACCATAATTGTCATGGACAAGGGTAAGATTGTAGAGATGGGATCCCACTCAACCCTAATAACAACTGGAGAAGGACTCTATTCGAGGTTATTCAAGCTACAGAGCTTTGATGAATCCTCGTAA 3774 0.4287 MAPSRPQKVVQMVEPVEDDGGGDGVDDLKKNVVRALPFFKLLSYADVIDWILMSLGMVGSIVHGMALPVGYLLLGKALNAFGNNIHDQDAMVKALKQVVPYVWYMAIATFPAGILEIGCWMYTSERQLSRLRIAYLKAVLSQEIGAFDTELTSGKVISGISKHMSVIQDAIGEKLGHFTSSCSTFFSGIVIAAICCWEVSLLCLVVVPLILMIGATYTKKMNTISTTKMFFHSEATAMIEQTISHIKTVYAFVGESSAMKSFRENMEKQFQISKGEALVKGVGTGMFQTVSFCSWALIVWVGAVVVTAGRAKGGNIIAAVMSILFGAISITYAAPDMQIFNQAKAAGYEVFQVIQRKPLISNEAQGRKVTEITGDIELRDVYFTYPSRPEKPILQGLSLSIPAGRTVALVGSSGCGKSTVISLVNRFYDPARGEVFIDGHNIKDLDLKFLRSNIGLVSQEPSLFAGTIKDNLKVGKMDADDQEIQKAAEMSNAHTFVSQLPNQYLTEVGQRGVQLSGGQKQRIAIARAILKNPPILLLDEATSALDTESEKLVQEALETAMQGRTVFLIAHRLSTVVNADMIAVVENGQVVETGTHQNLLDKSDFYRALYSMQNLEAAPESSTTISKSKSTHQGDSTDEAKLSEKQRETQINPMEDSELKGQETRKRNIFFRIWFGLKPREMAKIAFGSAAAAFSGVSKPVFGYCIITIGVAYFDPDAKRKVGYYSAFFSAIGLLSLLSNTIQHYFYGVVGEKAMANFRHALYKGVLRNEVGWFDRSDNTVGSLTSRIISDTALVKIIIADRMAVIVQCISSILIATGVSMYVDWRMALVAWAVMPCHFIGGLIQAKSAKGFSGDYAASHSELVALASESAANIRTIASFCHEEHVIMKAKTSQEIPMRKYRNESIKYGIVQGFSLCLWNIAHAVALWYTTILVERRQATFKNGIRAYQIFSLTVPSITELYTLIPTVISAINVLTPAFQTLDRKTEIEPDTQDDSQPERILGEVKFEHVKFNYPSRPAVTVLDNFSLQIEAGSKVAFVGPSGAGKSSVLALILRFYDPGAGMVSIDGRDIRGYNLRWLRTQIGLVQQEPLLFNCSIRDNICYGHNGASESEIVEVAREANIHEFVSNLPDGYNTVVGEKGCQLSGGQKQRIAIARTLLKKPAILLLDEATSALDAESERTIVSALKAINLKEDSGLCSRTTQITVAHRLSTVINSDTIIVMDKGKIVEMGSHSTLITTGEGLYSRLFKLQSFDESS 1257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02061 1257 MobiDBLite consensus disorder prediction 620 661 - -
Arst10g02061 1257 Pfam ABC transporter 394 543 IPR003439 GO:0005524
Arst10g02061 1257 MobiDBLite consensus disorder prediction 632 661 - -
Arst10g02061 1257 Pfam ABC transporter 1023 1172 IPR003439 GO:0005524
Arst10g02061 1257 Pfam ABC transporter transmembrane region 55 327 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst10g02061 1257 Pfam ABC transporter transmembrane region 690 944 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst10g02061 1257 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 998 1251 IPR027417 -
Arst10g02061 1257 Gene3D - 366 614 IPR027417 -
Arst10g02061 1257 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1005 1249 IPR003439 GO:0005524
Arst10g02061 1257 SMART AAA_5 403 595 IPR003593 GO:0016887
Arst10g02061 1257 SMART AAA_5 1032 1226 IPR003593 GO:0016887
Arst10g02061 1257 CDD ABC_6TM_Pgp_ABCB1_D2_like 700 988 - -
Arst10g02061 1257 PANTHER ABC TRANSPORTER B FAMILY 29 739 IPR039421 -
Arst10g02061 1257 SUPERFAMILY ABC transporter transmembrane region 673 990 IPR036640 GO:0005524|GO:0016020
Arst10g02061 1257 PANTHER ABC TRANSPORTER B FAMILY 29 739 IPR039421 -
Arst10g02061 1257 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 55 342 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst10g02061 1257 ProSitePatterns ABC transporters family signature. 1144 1158 IPR017871 GO:0005524|GO:0016887
Arst10g02061 1257 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 376 612 IPR003439 GO:0005524
Arst10g02061 1257 CDD ABC_MTABC3_MDL1_MDL2 376 613 - -
Arst10g02061 1257 SUPERFAMILY ABC transporter transmembrane region 40 358 IPR036640 GO:0005524|GO:0016020
Arst10g02061 1257 CDD ABC_MTABC3_MDL1_MDL2 1005 1251 - -
Arst10g02061 1257 FunFam ABC transporter B family member 1 995 1252 - -
Arst10g02061 1257 CDD ABC_6TM_Pgp_ABCB1_D1_like 53 350 - -
Arst10g02061 1257 Gene3D ABC transporter type 1, transmembrane domain 40 968 IPR036640 GO:0005524|GO:0016020
Arst10g02061 1257 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 686 970 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst10g02061 1257 ProSitePatterns ABC transporters family signature. 515 529 IPR017871 GO:0005524|GO:0016887
Arst10g02061 1257 FunFam ABC transporter B family member 4 366 621 - -
Arst10g02061 1257 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 368 613 IPR027417 -
Arst10g02061 1257 Gene3D - 995 1256 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02061 Arst-Chr10 69425080 69439270 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02061 16 1256 Calmodulin-binding Proteins AT2G36910 40.686 0.0 959
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02061 K05658 - qsa:O6P43_014878 1862.04