Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02058 ATGGAAACTCTGAAAGCTGCGATTCCCGAAGGCCTGAAGCGCATGATTGGTGATAGCACCGTCGATGATCTTCGCGCCACCTCTTCCTCCCTCCACAGCTTCTTCCATCACTTCGAGCCCTTCCACCAGTTACTCACTGAACTCGTGGATCCCAAGCATGCTCTCTGCGGCAAGAGCAAAGACGCTGCGCTCGAATCCAAGCAGCTCGGAAACCAGTGCTTCTCCAAAGGAAATTACGCCAACGCTCTAGATTTCTATACTCAGGCATTGCGAAAGGCACCTTTTGAGGATGGTGATATGGAAAATAATCTGGTTGCAACTTTGTATATCAATCGAGCTACTGTATTGCATAAAATGAGTCTTTTGACAGAGTGTTTGCGAGATTGTACTCGTGCCCTTCAGATGTGTCCAAGCAATGCAAAGGCATGGTACAGAAGAGGTAAGGCAAATGCTTCCCTGGGAAATTATAAAGATGCGATGTGTGACCTAAATATGGCTAAAACTGTGGAATCATCATTGAGTGGGAAGAGACAAATAGAAAGTGAGGAGAAAAATATTTTCGACCAATGCAAGAGCACAAGCACAGTAAGACAACGTAAGGAGAACACCTTGACTACAGTGGGTGAGGTTCCCCAAGTAATGCTACAGTGTGTCAACATACCTGAGAAAGGAAGAGGCATGGTATCATCAAATGCCATTTCACCTGGTTCTTTGGCTCATAGTGAAGAACCTTATGCTGTGATAATATTAAAGCAATGCCGGGACAGTCATTGCCACTATTGCTTGAATGACCTACCTGCTGATAGGGTACCCTGTAGATCATGTTCAGTACCACTGTATTGCTCCCAGCAATGCCAGACACAGGCTGGTGGGCAAGTCTTAAGGATTTTCCCAGAAGTTCACAGCATTATTGAGAAGTTACCCAGTGACCTTGGAGAGTATGCTGACAAAGTTATTCAAGGCCATGATTCCAAATGTGAAACACAGAATATCACTGAACATAAGCATGAATGTCGTGGTGTAAATTGGTCTGCAGTACTACCATCAGAGGTGGTTTTAACTGGCCGAATACTGGCAAGGTTTTTACTAGAGAGGACATCAGAAAATATTACATACTTTGTGGAGAAGCTGGTAGGTATTAAATGCAAGCAGCCGTTTTTCAGAACAGCTGATTCTCTTCTATTCAAATTTTATGTAATTTTTTGTCTGACAATGCAGGTTGTTATAATTATTTCTCAAATGAAAGTGAATTGTATGACTGTTGTTCGTTTAAAATCAAAAGATGCTTGTGGGCTATCCGATCAGTTCGGAGATTTTCCATCCTGTCCATACTTAACTAGTAATGTGGAACAGGTCAGGGTGGGTAAAGCTATTTATAAAGCTGGAAGTTTATTCAACCATTCTTGCCAACCAAATGTTCATGCATATTTTATTTCACGTAATTTGTGTATACGGACAACAAAAGCTATACCTGCTGAGGGTCATCTGGAGTTGTCTTATGGTCCACAGGTTGGGTTCTGGGATTGTAAAGATCGCCTTAATTTCCTAAAAGAGGAGTACATGTTTCAGTGCCAGTGTACTGGTTGTTCTGAAGTCAATCTATCCGACATTGTCCTCAATGCATTTTGTTGTGTCAATTCTAATTGTTTTGGTGCAGTCTTGGATAGCAGAGTAGTTAGCTGTGAAAAGCAGAAAATCAAGAATTTCATGAGACATTTAAAGATAGACAAGAATGATGACATTCATAAAGTGCTCAACCAAAATGATGCCTCCCATCATATTCAACCTGGATACTGTCTGAAGTGTGGTTCTTACCGTGATTTGGTGCCTTCACGTGCTGCAGTTGATAAAGCTTTAATATTCATAAAAAGGTTACAGGATGCAATATTATCAAAAGAAATTTTAAATACCACGATTGCAGATGCTTTGAGATCCTTGCATTTGCTAAGATCAAATTTGCATGCCTATAACAGGCTTATTGCAGAGGCAGAGGATAACCTTGCACAGGCCTTTTGTTTGTTGGGAGACTTTCAATTATCTATGGACCATTGTAAAGCATCCATCAAGATTCTAGAGAAGTTGTATCATCCTGATGATATAGTTATTGCATATGAACTTGTGAAGCTTTGTTCGATCCAACTTTCCGTAGGAGATGGTTCTGCAATGGATAGCATAAACCGGATTGGTGATATCTTCTCATGTTATTATGGACTTCATGCTGACTTGGTTTTCCCGTATCTTCAATACCTTAGGAGATAA 2259 0.4099 METLKAAIPEGLKRMIGDSTVDDLRATSSSLHSFFHHFEPFHQLLTELVDPKHALCGKSKDAALESKQLGNQCFSKGNYANALDFYTQALRKAPFEDGDMENNLVATLYINRATVLHKMSLLTECLRDCTRALQMCPSNAKAWYRRGKANASLGNYKDAMCDLNMAKTVESSLSGKRQIESEEKNIFDQCKSTSTVRQRKENTLTTVGEVPQVMLQCVNIPEKGRGMVSSNAISPGSLAHSEEPYAVIILKQCRDSHCHYCLNDLPADRVPCRSCSVPLYCSQQCQTQAGGQVLRIFPEVHSIIEKLPSDLGEYADKVIQGHDSKCETQNITEHKHECRGVNWSAVLPSEVVLTGRILARFLLERTSENITYFVEKLVGIKCKQPFFRTADSLLFKFYVIFCLTMQVVIIISQMKVNCMTVVRLKSKDACGLSDQFGDFPSCPYLTSNVEQVRVGKAIYKAGSLFNHSCQPNVHAYFISRNLCIRTTKAIPAEGHLELSYGPQVGFWDCKDRLNFLKEEYMFQCQCTGCSEVNLSDIVLNAFCCVNSNCFGAVLDSRVVSCEKQKIKNFMRHLKIDKNDDIHKVLNQNDASHHIQPGYCLKCGSYRDLVPSRAAVDKALIFIKRLQDAILSKEILNTTIADALRSLHLLRSNLHAYNRLIAEAEDNLAQAFCLLGDFQLSMDHCKASIKILEKLYHPDDIVIAYELVKLCSIQLSVGDGSAMDSINRIGDIFSCYYGLHADLVFPYLQYLRR 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02058 752 Coils Coil 646 666 - -
Arst10g02058 752 ProSiteProfiles SET domain profile. 213 501 IPR001214 GO:0005515
Arst10g02058 752 SUPERFAMILY SET domain 202 531 IPR046341 -
Arst10g02058 752 SUPERFAMILY TPR-like 63 691 IPR011990 GO:0005515
Arst10g02058 752 Gene3D Tetratricopeptide repeat domain 509 751 IPR011990 GO:0005515
Arst10g02058 752 Pfam SET domain 449 501 IPR001214 GO:0005515
Arst10g02058 752 Gene3D SET domain 408 500 IPR046341 -
Arst10g02058 752 Gene3D Tetratricopeptide repeat domain 38 203 IPR011990 GO:0005515
Arst10g02058 752 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 751 - -
Arst10g02058 752 SMART tpr_5 661 694 IPR019734 GO:0005515
Arst10g02058 752 SMART tpr_5 106 139 IPR019734 GO:0005515
Arst10g02058 752 SMART tpr_5 140 173 IPR019734 GO:0005515
Arst10g02058 752 SMART tpr_5 63 96 IPR019734 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Arst10g02058 SET 2.8e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02058 K24634 - gmx:100783548 1039.64