Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02014 ATGGGAGCCGTTGTTGACTGTTATCCGCCGCACGCCGGCGAGGTTGCAGTTTTGTCTCTCAACTCGCTTCCCTTAGGTTTCCGATTTCGACCTTCCGACGAAGAGCTTGTTGATTATTATCTGAGACAGAAAATCAACGGAAATGGAGAAGAAGTCTGGGTTATTCGAGAAATCGATGTTTGCAAATGGGAGCCTTGGGACTTGCCAGATTTGTCGGTGATAAGAAACAAGGATCCGGAGTGGTTCTTCTTCTGTCCACAGGACCGGAAGTATCCAAATGGTCACCGGTTGAACCGAGCAACCAATCATGGGTACTGGAAGGCCACAGGAAAAGATCGTAAGATCAAGTCAGGTTCCACCTTGATTGGGATGAAGAAGACTCTGGTGTTCTACACAGGTCGTGCTCCCAAAGGGAAGAGAACCAATTGGGTCATGCATGAGTACCGCCCCACCCTCAAGGAGCTTGATGGCACCAACCCTGGACAGAATGCGTATGTACTCTGCCGATTATTCAAGAAACAAGATGAGAGTCTTGAGGTTTCAAACTGTGATGAGGTGGAACAAACAGATTCCGCTCCCATGGCGGCCAATTACTCCCCTGAAGAAATACAGTCTGATCAGGCTCTGGCTGAAGTATCGCCGTCTCAAGTTACAGATGAGAAGCACCAGGGTGTTATCCCTGAGATCTCTGAGGAAGCGGTTTCCAACGTTATAACCTCTGCTGATTGCCATAGTGACGGATATGATGCTTGTGAAAGGCGAAATCAAGCTTTTGAACTACCTGCTGAGGACATTCCGCCGTTGAATTGGGACATATTCAATGACCCCGAGGACAAGATATTTGATGACAAATTATTCTCCCCAGTCCATAGCCATATTCCACCAGAATTTTACTACCAAGCAAACAATGAGACAAATATTGCAGACATCTTAAATTCTGTCAATTGGGATGAGATCTCCTATGAGGATCCCTATAGTCAAGCACAGAACAACTTTTTTAATAATGTTAAGCAAAGTGTATCAGGTAGCGAACCAGATGCAGGGCTGACCAATATGACATGCATACACCCGACGAATGTTGTTTATCCCGAGGAGGCAATTCACAGAAAGGTTGCTTTGGCAACAACTCCGCAATTTTGCAGCACCTTCACGTCTGACTTCAGTGCTGATGAGCAGAAGAGCAGTGTCGCGTTAATTCAAAACAATTCCCAGATGGCTTCTTTTCCGGATGCCAGAACAGGCCAAGTGTATAACGTATTCAATGATTATGAGCAGCCGAGAAACCTTAATACCTATGTTAGTGGTGATACTGGAATCAAGATAAGGACTCGACAAGTGCGAAATGAACAACCAGCAATGATCTTTACAGATCAAGGTAATGCAGCAAGGAGAATCCGATTGTTAAAGCAGTGTGCAAATGTCTCAAACAAGATGGCAGATGATGGGAGTCCTAAACAAGAGCATGATTCAAAACCAATAATTGCAGGGAACAAAAACAAAACTTTCAAAAGTCACACTGCAGATAAGCATGATACTGCTAATGATCTGAATGAACGCCAGGAGAAAACTGAGTCAACTGATAAAAGAAACATGATATCTAAACTTGCAAAAGGAGGTTCTTCCATGTTGGGGTTGAAGGGATTATTGCGCAGAAGGCTTAGTTACATATCAAAGGCCTCCTCCAATTTCAAAATGTGGTCATGTGTTGTTGTGGCTTCTGCCTTTGTATTGGTCTCGTTTCTGTTCTTTGCTAACATATGGGGATATATTAACTTATGA 1779 0.4413 MGAVVDCYPPHAGEVAVLSLNSLPLGFRFRPSDEELVDYYLRQKINGNGEEVWVIREIDVCKWEPWDLPDLSVIRNKDPEWFFFCPQDRKYPNGHRLNRATNHGYWKATGKDRKIKSGSTLIGMKKTLVFYTGRAPKGKRTNWVMHEYRPTLKELDGTNPGQNAYVLCRLFKKQDESLEVSNCDEVEQTDSAPMAANYSPEEIQSDQALAEVSPSQVTDEKHQGVIPEISEEAVSNVITSADCHSDGYDACERRNQAFELPAEDIPPLNWDIFNDPEDKIFDDKLFSPVHSHIPPEFYYQANNETNIADILNSVNWDEISYEDPYSQAQNNFFNNVKQSVSGSEPDAGLTNMTCIHPTNVVYPEEAIHRKVALATTPQFCSTFTSDFSADEQKSSVALIQNNSQMASFPDARTGQVYNVFNDYEQPRNLNTYVSGDTGIKIRTRQVRNEQPAMIFTDQGNAARRIRLLKQCANVSNKMADDGSPKQEHDSKPIIAGNKNKTFKSHTADKHDTANDLNERQEKTESTDKRNMISKLAKGGSSMLGLKGLLRRRLSYISKASSNFKMWSCVVVASAFVLVSFLFFANIWGYINL 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02014 592 SUPERFAMILY NAC domain 18 173 IPR036093 GO:0003677|GO:0006355
Arst10g02014 592 Gene3D NAC domain 32 177 IPR036093 GO:0003677|GO:0006355
Arst10g02014 592 MobiDBLite consensus disorder prediction 502 528 - -
Arst10g02014 592 Pfam No apical meristem (NAM) protein 24 149 IPR003441 GO:0003677|GO:0006355
Arst10g02014 592 ProSiteProfiles NAC domain profile. 23 173 IPR003441 GO:0003677|GO:0006355
Arst10g02014 592 FunFam Nac domain-containing protein 86 32 176 - -
Arst10g02014 592 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 22 247 - -
Arst10g02014 592 MobiDBLite consensus disorder prediction 476 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02014 Arst-Chr10 67922677 67925934 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02014 15 470 NAC Transcription Factor Family AT4G35580 40.558 1.04e-95 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst10g02014 NAM 5.1e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02014 - - gmx:100777071 663.685