Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01988 ATGGGTGAGGTAGTTGTGAGCGAGAGATTAGTTGGAACGGCTGAGGAAGAAGAGAAGCAGACGACTACGGTGGCGGCTGCCGAGGAAGAAACTACTGCAACGGCGGGAAAAGGCGGAGGAGGAGAATCGAAAGGGCTGATGAGGTGGGAGAAGTTCTTGCCGAAGATGGTACTGAGGGTGCTCTTGGTTGAAGCTGATGATTCCACGAGGCAGATTATAGCGGCGCTCCTCAGAAAATGCAGCTACAAAGTGGCGGCTGTTCCTGATGGCCTAAAGGCATGGGAAATACTCAAGGGAAGACCACGCAATATCGATCTAATACTGACGGAAGTGGATTTACCTGCCATATCTGGCTATGCACTTCTCACTTTAATTATGGAACATGATATTTGCAAAAATATCCCTGTCATAATGATGTCCTCACAAGATTCTATAAGTACAGTATACAAGTGTATGCTGAGGGGAGCTGCTGATTATCTTGTTAAGCCCCTTAGAAAAAATGAATTGAGGAATTTGTGGCAGCATGTTTGGAGAAGGCAATCGTCAACTGTTGCCATGAATGGCCTCCAAGATGAGAGTGTTGCGCAGCAGAAGGTTGAAGCCACTGCTGAAAACAATGATGCTAGTATTCGTTCAAGTGGTGATGCTGCTTCCATTCAGAGAAATAAGGAATTAATCGAGAAAGGAAGTGATGCACAGAGCTCTTGCACAAAGCCCGACCTGGAAGCTGAGAGTGGCCCTGTCGATAACATGCAGGAATTTGCTTCACTGAAATGTGGTGAATCATATCCAACTGGAACAATGACACAAGAGGTAGAAACGTGCATGCGTTTGGGGCAGATATCAGTTATGCATGACAGTCATGCTGGAGGATTAGCTATGGCTAGTAGCAAAAATTGTGAGACAAGCACAACGAATGGCAAGGATGGCGATACAGAACATTTTCGGAGTGCTACTATCTGTGGTGAGGCTCATGACAATCACTGTGTTCAAATTAGCTGTTCTAAGGAAGCTATTGACTTGATTGGAGCATTTCATAATCGTCCAAACTGCAGTCTCAAAACTCCCACAGTTAACTGCACAGGAACGGTAACCATTGAAATGCCTTGTTATTCTTTTTCAAAGAACTAAAGTTACATGATTTGATATGCTACATCTTTAACTTTAGAATAGGGATGTTTCAAGTTTTTCAAAGATTGTATATATGCTCATCGTTAAGAGGTTTCTTGCAGGTATACAAACAAGCAATTTCAAGCCTCACCTGCGATTTTAAACTTCTCTGACCAACAAAGGGAACAGAGAACAAATTGCGAGAAAAGTATATCCCATTTTGCTACTGGGTGTAATTCAGAAAGTTCAACACCTAGTGTGCAAAGAAATCTTTTATCTCCAACTACACCCCAATCGAAAGAATCTGAAGCAGCAACTTCACACTCACAACAGCAAGGGCACTCTCTCCCGATTGCAGTTAAAGGTGTAAGGTTCAATGATTTGTGCACGGCCTATGGTTCTGTACTTCCTCCAATGTTTCGCACACAATCGGGTCCACCATTGGTGCCTAGCCCCAGTTCAGTTGTGCTTCTTGAACCAGCCTTTCAAGTAAATGGATTTTATCAATCAAGTGTTAAAGACAATAGTTCAGAGCAAGTTTATGAATCTCCCAGTTCTGGTGGAAAAAGTGCTCCAAACAACATGATTTCCAGACCGGAACACAAACCAGAACATGCTGAGGATCGAAGACATATCTCTCCTGCAACTGATCAAAGTGGATCCGGTAGCTTCTGTAATGGAAATGCAAGCCATCTTAATAGCATGGGGTATGGAAGCAACTGTGGAAGCAGCAACATTGTTGATCAGGTCCCAATTGGCAGAGCAGCTTCAGAGGGTAAGAATGAAGAGATGGCAAACAATGCGAGCTCTCATCGATCTATCCAAAGAGAAGCAGCTCTAAATAAGTTCCGCTTGAAAAGGAAAGAGAGATGCTATGAGAAGAAGGTTCGATATGAGAGCAGAAAGAAACTAGCAGAGCAGCGCCCGAGAGTGAAAGGTCAATTTGTTCGTCAAGTGCAGCCGGATGCACTCACTGCAGAGAAAGATGGCAAAGAATATGATCTTTAA 2118 0.4367 MGEVVVSERLVGTAEEEEKQTTTVAAAEEETTATAGKGGGGESKGLMRWEKFLPKMVLRVLLVEADDSTRQIIAALLRKCSYKVAAVPDGLKAWEILKGRPRNIDLILTEVDLPAISGYALLTLIMEHDICKNIPVIMMSSQDSISTVYKCMLRGAADYLVKPLRKNELRNLWQHVWRRQSSTVAMNGLQDESVAQQKVEATAENNDASIRSSGDAASIQRNKELIEKGSDAQSSCTKPDLEAESGPVDNMQEFASLKCGESYPTGTMTQEVETCMRLGQISVMHDSHAGGLAMASSKNCETSTTNGKDGDTEHFRSATICGEAHDNHCVQISCSKEAIDLIGAFHNRPNCSLKTPTVNCTGTVTIEMPCYSFSKNXSYMIXYATSLTLEXGCFKFFKDCIYAHRXEVSCRYTNKQFQASPAILNFSDQQREQRTNCEKSISHFATGCNSESSTPSVQRNLLSPTTPQSKESEAATSHSQQQGHSLPIAVKGVRFNDLCTAYGSVLPPMFRTQSGPPLVPSPSSVVLLEPAFQVNGFYQSSVKDNSSEQVYESPSSGGKSAPNNMISRPEHKPEHAEDRRHISPATDQSGSGSFCNGNASHLNSMGYGSNCGSSNIVDQVPIGRAASEGKNEEMANNASSHRSIQREAALNKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQVQPDALTAEKDGKEYDL 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01988 705 MobiDBLite consensus disorder prediction 545 599 - -
Arst10g01988 705 MobiDBLite consensus disorder prediction 568 584 - -
Arst10g01988 705 SMART REC_2 58 173 IPR001789 GO:0000160
Arst10g01988 705 ProSiteProfiles Response regulatory domain profile. 59 177 IPR001789 GO:0000160
Arst10g01988 705 ProSiteProfiles CCT domain profile. 646 688 IPR010402 GO:0005515
Arst10g01988 705 MobiDBLite consensus disorder prediction 622 645 - -
Arst10g01988 705 MobiDBLite consensus disorder prediction 12 42 - -
Arst10g01988 705 Pfam Response regulator receiver domain 60 171 IPR001789 GO:0000160
Arst10g01988 705 SUPERFAMILY CheY-like 58 185 IPR011006 -
Arst10g01988 705 MobiDBLite consensus disorder prediction 682 705 - -
Arst10g01988 705 MobiDBLite consensus disorder prediction 545 563 - -
Arst10g01988 705 MobiDBLite consensus disorder prediction 448 485 - -
Arst10g01988 705 CDD psREC_PRR 60 163 - -
Arst10g01988 705 PANTHER TWO-COMPONENT RESPONSE REGULATOR 58 243 IPR045279 GO:0009736
Arst10g01988 705 Gene3D - 56 274 - -
Arst10g01988 705 MobiDBLite consensus disorder prediction 585 599 - -
Arst10g01988 705 Pfam CCT motif 646 688 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01988 Arst-Chr10 66094057 66098829 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g01988 45 262 Response Regulator Gene Family AT5G24470 66.818 7.23e-97 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Arst10g01988 Response_reg 1.2e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01988 K12130 - gmx:100777119 919.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g01988 10 66094057 66098829 Arst10g01988 10 66094057 66098829 ECH