Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01944 ATGTCACGGCCGAGGCAGAACAAGATGTTGATGAATCCAAACACTGCCAAACATGTAATTGGTGACACAACCTATACCAAGATCTTTGTTGGAGGCTTAGCTTGGGAAACAAAAAGAGACACTCTGAAACGTTATTTTGATCAGTTTGGAGAGATCTTAGAAGCTGTTGTCATCACTGACAGAAACTCTGGAAGATCAAAAGGATACGGCTTTGTAACATTCAAGGACCCAAATTCTGCAATAAGGGCTTGTCAGAATCCATATCCTGTGATAGATGGAAGGAGGGCTAATTGTAATCTTGCATCTCTTGGTGCACAAAAAATTGATCCATCATCTATGACAGCTACTAGACAAAAATTCAGTAGCCCTTCTTGGAATACAGCACCAATTCCAGTTCATCAAGGAACCTCCACTTATTATAATCAGCATATTCCACAGTATACATTTCCTTATCCACCCTACAGGTATCCAGGTTACCCACCCCAACAGGAAGTATATGAAATGAATTACTATAATGCATATGGTGGACAACACTTTCCATTTCGTTGGTTACCAGCATATTACCAACCAATTTATGGGCTAAGTAGGCATCAATTTGTTCCAACAACAGCTTATGTGAAAAAGACACAATTCCCTGATATGTCACCTCAGGAGTTCACACCTACTGTTGCTTCATCAGAACCTATTTCAGCTTCTTCATCAATTTCTACCACTGGATTAATAACAGGAACTGTAGATGCAGGAGGAGGAGGAGGAGTACTAGGATCACAACAAGAACAGAAATCATCATCTTCAGGTTAA 801 0.4007 MSRPRQNKMLMNPNTAKHVIGDTTYTKIFVGGLAWETKRDTLKRYFDQFGEILEAVVITDRNSGRSKGYGFVTFKDPNSAIRACQNPYPVIDGRRANCNLASLGAQKIDPSSMTATRQKFSSPSWNTAPIPVHQGTSTYYNQHIPQYTFPYPPYRYPGYPPQQEVYEMNYYNAYGGQHFPFRWLPAYYQPIYGLSRHQFVPTTAYVKKTQFPDMSPQEFTPTVASSEPISASSSISTTGLITGTVDAGGGGGVLGSQQEQKSSSSG 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01944 266 PANTHER BOULE-RELATED 17 215 - -
Arst10g01944 266 MobiDBLite consensus disorder prediction 240 266 - -
Arst10g01944 266 SUPERFAMILY RNA-binding domain, RBD 5 106 IPR035979 GO:0003676
Arst10g01944 266 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 28 85 IPR000504 GO:0003723
Arst10g01944 266 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 26 103 IPR000504 GO:0003723
Arst10g01944 266 SMART rrm1_1 27 99 IPR000504 GO:0003723
Arst10g01944 266 CDD RRM_RBM24_RBM38_like 26 101 - -
Arst10g01944 266 Gene3D - 2 113 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01944 Arst-Chr10 64656827 64659208 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g01944 22 102 C2H2 Transcription Factor Family AT2G19380 43.210 2.98e-15 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01944 - - adu:107469851 454.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g01944 10 64656827 64659208 Arst10g01944 10 64656827 64659208 ECH