Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01908 ATGGCAACTACAACTACTAAAATTGTAGAAGCTAGGGTTTCTGAAGAAGGGATCATTAAAACATTTCATAATGACGATGATGAAGCGCTCGATGCTGCGGAGAATGGAGTTGCGGGAGCAGATGACTACGAGGTTGTGAGGAAGGTGGGAAGAGGGAAATATAGCGAGGTCTTTGTGGGTGTTTACTCCACCGATAATGAAAAATGCATCATCAAGATCCTCAAACCCGTCAAGAAGAAAAAGTTAAAGAGGGAGATCAAAATATTGCATAATCTTTGTGGAGGTCCCAATGTTATAAAGCTGCTTGACATTGTTAGGGACTAG 324 0.4167 MATTTTKIVEARVSEEGIIKTFHNDDDEALDAAENGVAGADDYEVVRKVGRGKYSEVFVGVYSTDNEKCIIKILKPVKKKKLKREIKILHNLCGGPNVIKLLDIVRD 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01908 107 PANTHER CASEIN KINASE II SUBUNIT ALPHA 38 107 IPR045216 GO:0004674|GO:0006468
Arst10g01908 107 Pfam Protein kinase domain 43 106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g01908 107 SUPERFAMILY Protein kinase-like (PK-like) 36 107 IPR011009 -
Arst10g01908 107 Gene3D Phosphorylase Kinase; domain 1 30 107 - -
Arst10g01908 107 ProSiteProfiles Protein kinase domain profile. 43 107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g01908 107 FunFam Casein kinase II subunit alpha 29 107 - -
Arst10g01908 107 ProSitePatterns Protein kinases ATP-binding region signature. 49 72 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01908 Arst-Chr10 62686410 62688418 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g01908 41 107 EF-hand Containing Proteins AT2G38910 31.507 4.56e-06 42.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Arst10g01908 Pkinase 4.3e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01908 K03097 - adu:107469801 176.407