LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst10g01889	ATGGATAATGGTAGCAACACGTTGGACTTTTGTAATCTCAAAGTAGTATCCGCCTTGGGACGCGGTGCCAAGGGCTTGGTTTTCTTGGCGAAAATAAATGAAGGGCAAAACGAGAAGCAATGGCTGGCGTTGAAGGTGGTCTCAAAAGCTTTTGTTCGGATGAGAAATAGCAGCCATTGCAAGAGGGTCTCGTTCGAACAACAAATATTGCGTCGTTTTAATCACCCTCTCTTGCCACAGTTGCGAGGGGTCTTGGAAACCGAGGAGCTGCTAGGGTTTGCCATTGACTATTGCCACGGCGGAAACTTACATTCTCTAAGAAGGAAACAATCTGAGAAGACGTTTCCTGTTGATGCCATAAGGTTTTATGCTGTGGAATTGGTCCTCGTATTGGACTACTTGCATAGTCTTGGAGTAGTGTACCGAGATTTGAAGCCAGAGAACATACTGATTCAAGAAACAGGTCACATAATGCTCGTGGATTTTGATCTCTCCAAGAAGTTGAACCCAAAGTCACCGCAATTGTTGAGTGGCATCTCATCACCAAGTTCTGACTCAGCATTGCTGGTTGACCGAAGAAAGCGATTGTTACCAGGTTGCTACTGTTGTCACTCGGGTATCATGCCTCTTGACTCAGACAGTCAACTCGGCACTAACTCACCAGCACGGAGCGAGTCCGACTCAGTGGAGAAATCCAACTCATTTGTCGGAACAGAGGATTACGTGGCACCAGAGATTATAACTGGTGAAGGACACAACTTCGGTGTTGATTGGTGGTCCCTCGGTGTTGTTTTGTACGAGATGCTGTATGGAATGACACCATTTAAGGGCGTAAACAGAAAAGAGACATTTCAACGGATCTTGATGAAACAACCGGATCTATCAGGTGAAAACACACCGTTGAGGGACCTGATCAAGAAGTTGCTTGAAAAGCATCCAGACCGTAGGATTGAGGTACATGAAATCAAGTGCCATGATTTCTTTAAGGGTGTGAACTGGAACTCAGTTTTGCAAATTGCTCGTCCACCATATATTCCTCAGAATGACGTTGAGGACAAAGCAGGGTTTTCTAGAAAAGACGTAGAGTCGTTTGTTCGTAAAATTTTTTTCAAGAATGACAATAAGGAAGAGAAGCCCAAAGAGAATAAGGTTTATAACAAAAATCAAAATACGGTGTGGGTCGACAAATTGACTGACAATCCCACTCAAAACGAAGACTTCTTAATGTTTTGA	1233	0.4396	MDNGSNTLDFCNLKVVSALGRGAKGLVFLAKINEGQNEKQWLALKVVSKAFVRMRNSSHCKRVSFEQQILRRFNHPLLPQLRGVLETEELLGFAIDYCHGGNLHSLRRKQSEKTFPVDAIRFYAVELVLVLDYLHSLGVVYRDLKPENILIQETGHIMLVDFDLSKKLNPKSPQLLSGISSPSSDSALLVDRRKRLLPGCYCCHSGIMPLDSDSQLGTNSPARSESDSVEKSNSFVGTEDYVAPEIITGEGHNFGVDWWSLGVVLYEMLYGMTPFKGVNRKETFQRILMKQPDLSGENTPLRDLIKKLLEKHPDRRIEVHEIKCHDFFKGVNWNSVLQIARPPYIPQNDVEDKAGFSRKDVESFVRKIFFKNDNKEEKPKENKVYNKNQNTVWVDKLTDNPTQNEDFLMF	410

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst10g01889	410	ProSiteProfiles	Protein kinase domain profile.	13	328	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst10g01889	410	SUPERFAMILY	Protein kinase-like (PK-like)	13	350	IPR011009	-
	Arst10g01889	410	PANTHER	FLIPPASE KINASE 1-RELATED	7	353	-	-
	Arst10g01889	410	Gene3D	Phosphorylase Kinase; domain 1	14	101	-	-
	Arst10g01889	410	Gene3D	Transferase(Phosphotransferase) domain 1	102	171	-	-
	Arst10g01889	410	MobiDBLite	consensus disorder prediction	214	233	-	-
	Arst10g01889	410	ProSiteProfiles	AGC-kinase C-terminal domain profile.	329	410	IPR000961	GO:0004674\|GO:0005524\|GO:0006468
	Arst10g01889	410	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	139	151	IPR008271	GO:0004672\|GO:0006468
	Arst10g01889	410	Gene3D	Transferase(Phosphotransferase) domain 1	226	365	-	-
	Arst10g01889	410	FunFam	Serine/threonine-protein kinase OXI1	230	347	-	-
	Arst10g01889	410	FunFam	Serine/threonine-protein kinase OXI1	102	170	-	-
	Arst10g01889	410	SMART	serkin_6	13	328	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst10g01889	410	Pfam	Protein kinase domain	230	328	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst10g01889	410	Pfam	Protein kinase domain	15	173	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst10g01889	Arst-Chr10	60890613	60892313	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst10g01889	5	410	AGC Kinase Gene Family	AT3G25250	52.471	1.26e-140	406

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_RSK-2	Arst10g01889		Pkinase	3.4e-31	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst10g01889	K20714		-	gmx:100813693	494.197