Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01838 ATGTTGTGCTCTCTCTTCTTCTTCTTCTCTTTCTTCTCTCTCAGCTGCTCAACCAACATGCTCTGCTGCCTTCCCTTCTTTTTTGGATTTGCGGTTTTTCTTGGAATGCACTTCCCTTCATTAATGGCTGATTGCCCTTTGGATTTTTCCGCTTCAAACTTTACACTGGCTTCCTCTCTATGTTCTAACCAAGGTGATAGGGGAAACTGTTGCCGCTACATTAATGCTAATGTTGCAATTTCTGTTGCTCGTTTCGCTAATTCAACGAGCATCCTGGGGGTCCCTCCAAATGACTCTGTTTCCTGTCTCCAAACTATATCTGATAACTTGCAACTTAATGGAGTTCCACAAAATGCAACAGCTTTCTGTGGTTTTGGGACCAAAATTCCTGTTAATTATGAATGTAAGGGACGGACTAGTGTCATGCAAATGCTGCAATCTCCTAGATTCGCGGAGGTCACAAAAAATTGCAAAGTGTCACTTGGAGAGGAAAGAAAATGTAGGAAGTGCTTAAATGCAGGCTTTGGTTATCTGCATCATTTGGGAATTAATGATAATATAACACTCAGTACTTGTCGTGATGCAACTTTTGCTGCACTTGCAAGCCAACTTGATCACCAATCTACAACTGACATTGCAAGCTGTTTCTTTGGTGTTCAAGGACTTCTTGGGCCTCCTGTGTCATCGTCCCCATCCTTGCCGAGTCCCGAGGCTTCTCCAAGTCCAGTGGTTGCTGATAGTCCAAGCCAACTATTGTTAGGTGCACCTTTTAAGGGAAACCACCATACATATCACTTGACATTAGTTCCAGGTATTGCTATTGCCGTCACCGCTGTTGCTGTTGGGATGCTCATAGTCTTGATAGTTCTAATTCGTAAAAAAAGCAGAGAGCTAGATGATCCTGATGATTTCGGAAAAACTTCTTCAAAAACCATGCCTCCTTTTGCAACATGGAAGTTTCAGGAAGGTTCTTCAGCTATGTTCCGAAAATTTAGCTACAAGGAGATAAAGAAGGCAACAGAGGATTTTAGCACCGTCATCGGGCAAGGGGGATTTGGAACAGTGTATAAAGCTCATTTTAGTGATGGCCTGGTGGCAGCAGTGAAGCGCATGAACAGAGTGTCAGAGCAGGGAGAGGATGAGTTCTGCCGAGAAATCGAACTTCTTGCACGGCTGCACCATCGGCATCTTGTTTCTTTAAGAGGCTTCTGCATAAAAAAACACGAGAGGTTTCTGATGTATGAGTACATGGGAAATGGAAGCTTGAAAGATCATCTTCATTCTCCTGGTAGAACACCGCTAAGTTGGCGAACTAGAATCCAAATTGCGATTGACGTAGCTAATGCATTGGAGTACCTTCATTTATATTGTGATCCTCCTCTGTGCCATAGAGACATTAAGTCTAGCAACACTTTGCTGGATGAGAATTTTGTTGCTAAGATAGCCGATTTTGGCCTTGCACAGGCATCAAAAAATGGTTCGATATGCTTTGAACCTCTAAACACTGAAATCCGAGGAACTCCAGGTTATATGGATCCAGAATATGTTGTTACTCAAGAGCTCACCGAGAAAAGCGATATCTACAGTTTTGGGGTGTTACTACTAGAAATCGTGACAGGAAGGCGAGCTATTCAGGATAATAAGAACTTGGTGGAATGGGCGCAACCGTATATGGAATCCGAAACCAGATTATTGGAGCTAGTAGATCCCAACGCGAGGGAGTCTTTTGACTTGGATCAACTCCATACATTAGTGTCTATAGTAGGATGGTGCACCCAGAGAGAAGGAAGGGCAAGGCCTTCAATAAAACAGGTTCTTCGGCTTCTTTATGAGACGTCAGAACCGATGCACAGTGGTTTCCTACAATCCGGCGATGATGAAGACTGTCAGGGAAGTCAGCAGAGAGGCAGAAGAAGCAAGGGGAAAATGCACCGGAATGAAGCTATTTTCAACAGCGGCGATGGAAGATACCTCGCCTCGTCCTCAAGCACATCTCGATCGTATTGCAGTAGGACCTTTTTACTCGAGAGTGGCTCTCCGCAGTCGCCGCCAAATATTTTCTCAGTTTAA 2070 0.4401 MLCSLFFFFSFFSLSCSTNMLCCLPFFFGFAVFLGMHFPSLMADCPLDFSASNFTLASSLCSNQGDRGNCCRYINANVAISVARFANSTSILGVPPNDSVSCLQTISDNLQLNGVPQNATAFCGFGTKIPVNYECKGRTSVMQMLQSPRFAEVTKNCKVSLGEERKCRKCLNAGFGYLHHLGINDNITLSTCRDATFAALASQLDHQSTTDIASCFFGVQGLLGPPVSSSPSLPSPEASPSPVVADSPSQLLLGAPFKGNHHTYHLTLVPGIAIAVTAVAVGMLIVLIVLIRKKSRELDDPDDFGKTSSKTMPPFATWKFQEGSSAMFRKFSYKEIKKATEDFSTVIGQGGFGTVYKAHFSDGLVAAVKRMNRVSEQGEDEFCREIELLARLHHRHLVSLRGFCIKKHERFLMYEYMGNGSLKDHLHSPGRTPLSWRTRIQIAIDVANALEYLHLYCDPPLCHRDIKSSNTLLDENFVAKIADFGLAQASKNGSICFEPLNTEIRGTPGYMDPEYVVTQELTEKSDIYSFGVLLLEIVTGRRAIQDNKNLVEWAQPYMESETRLLELVDPNARESFDLDQLHTLVSIVGWCTQREGRARPSIKQVLRLLYETSEPMHSGFLQSGDDEDCQGSQQRGRRSKGKMHRNEAIFNSGDGRYLASSSSTSRSYCSRTFLLESGSPQSPPNIFSV 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01838 689 SMART serkin_6 341 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g01838 689 Pfam SPARK 43 181 IPR043891 -
Arst10g01838 689 FunFam Putative receptor-like protein kinase 309 416 - -
Arst10g01838 689 PANTHER OS01G0750732 PROTEIN 188 633 - -
Arst10g01838 689 Pfam Protein kinase domain 345 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g01838 689 MobiDBLite consensus disorder prediction 619 646 - -
Arst10g01838 689 ProSiteProfiles Protein kinase domain profile. 341 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g01838 689 Gene3D Phosphorylase Kinase; domain 1 310 416 - -
Arst10g01838 689 Gene3D Transferase(Phosphotransferase) domain 1 417 629 - -
Arst10g01838 689 SUPERFAMILY Protein kinase-like (PK-like) 322 612 IPR011009 -
Arst10g01838 689 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Arst10g01838 689 CDD STKc_IRAK 347 609 - -
Arst10g01838 689 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524
Arst10g01838 689 FunFam Putative receptor-like protein kinase 417 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01838 Arst-Chr10 55514128 55519298 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g01838 37 688 Receptor kinase-like Gene Family AT3G19300 60.122 0.0 751
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Arst10g01838 Pkinase 1.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01838 - - ahf:112715638 1321.99