Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01756 ATGTGTATTCGAATCATAGGAGCAGGTAATCGACGATATGCTTCTATTGGTGACATTGTTGTTGCTGTAATCAAGGAAGCGGTACCAAATATGTCTTTAGAAAGATCAGAAGTGATTAGAGCTGTAATTGTACGTACTTGTAAAGAACTTAAACGTAGCAATGGCATGATAATACAATATGATGATAATGCCGCGGTTGTCATTGATCAAGAGGGAAATCCAAAAGGAACTCGAATTTTTGGCGCAATCGCCCGGGAATTGAGACAGTTAAATTTCACTAAAATAGTTTCATTAGCACCTGAGGTATTATAA 312 0.3718 MCIRIIGAGNRRYASIGDIVVAVIKEAVPNMSLERSEVIRAVIVRTCKELKRSNGMIIQYDDNAAVVIDQEGNPKGTRIFGAIARELRQLNFTKIVSLAPEVL 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01756 103 ProSitePatterns Ribosomal protein L14 signature. 41 67 IPR019972 -
Arst10g01756 103 Gene3D Ribosomal protein L14 1 103 IPR036853 GO:0003735|GO:0005840|GO:0006412
Arst10g01756 103 SUPERFAMILY Ribosomal protein L14 1 103 IPR036853 GO:0003735|GO:0005840|GO:0006412
Arst10g01756 103 SMART Ribosomal_L14_2 1 103 IPR000218 GO:0003735|GO:0005840|GO:0006412
Arst10g01756 103 Hamap 50S ribosomal protein L14 [rplN]. 2 103 IPR000218 GO:0003735|GO:0005840|GO:0006412
Arst10g01756 103 Pfam Ribosomal protein L14p/L23e 1 103 IPR000218 GO:0003735|GO:0005840|GO:0006412
Arst10g01756 103 NCBIfam 50S ribosomal protein L14 1 103 IPR005745 GO:0003735|GO:0006412|GO:0015934
Arst10g01756 103 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 1 102 IPR000218 GO:0003735|GO:0005840|GO:0006412
Arst10g01756 103 FunFam Ribosomal protein L14 31 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01756 Arst-Chr10 46468810 46469121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g01756 14 99 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 37.209 7.44e-14 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01756 K02874 - csin:14412462 190.274