Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01628 ATGGGTTCGGTTCCTGCAGAACTGAGCTTAGACATTAGAGCACCAACGCCACCACCCCCACCACCACCGTCAACACCGAGTTTCATTCCCAAAACCATAACTGATTTCCTCTCCGCGCTTTCAACCACGGGAATCACCGCATCTGAGAAGCAATCCAGGATCAACGGTTTCCTCTCTCACTTGGAAGACGAATACAACAAGATCCACGCCTTCAAGCGCGAGCTTCCTCTCTCCATGCTCCTCCTCAGCGACGCAATTGTGGCACTGAAAGAGGAATTGGAGAAATGCAGTGAAGGTGAGCGTAAATCTGAGCCAGTGCTGGAAGTGTTCATTCCTTTGAAGAGAGAGTTCGATCATAGCGAAGACGATGAAGAACATAATAATAATAATAATAATAATGATAATAACAACAACAATAACAATATTCGACAGGAGAAAGAATGCAGAGATAAGATGAGTTGGATGAGTTCCGTTCAGCTCTGGAACGCTTCTTCTTCAACCACACTTAACAATAATAATAATAATAATGCCTTTGATAATAATCACAAACACCATCACCAAAATCATCATCATAAATTCGGAACAAAGAAGAATCAGGAATATGTGGTTGAGAATCCTTTTCAATCTCATAGCAATGTTAGAAATAATGGAGGAAGAGGGTTTATGCCTTTTACTTCATACACTTCTTGTTCAGTGCCGGTCACTACTGTGGCTCTCTCTGCAACCAAAGAAGAGAAGGAAGATATTGGTGCTATTAATAGGCTTCCTCTGTTGACCCCTGCTGCTGCTGGTGGTGGAGTGAAGACTCTCAGGGAAGGTTCTGGTTCGAGTGGATCCAGAACCAGCTCCAACAACAGGCCGGTTTCCACGTCTTCTCCTCCGGCGGCTGCACACCGCACTGCCATGATGCCTCTTCAGCCTCAGCAGACTGCTAGGAAACAGAGGAGGTGCTGGTCCCCGGAGCTGCACCGACGATTTGTCAATGCGTTGCAAAAGCTTGGTGGTTCTCAAGTGGCAACACCAAAGCAGATTAGAGAACTCATGCAGGTTGATGGACTCACAAACGATGAAGTGAAGAGCCATTTACAAAAATACCGGCTTCATACAAGAAGAGTTCCATCTGGAAGTGGTAACCATAGTCATAATCATAATCAATCTGTTGTAGTTCTTGGAGGATTGTGGATGTCACAAGGGCAAGATCAGTGCAATGACTCATCAAAGGGTAGTAGCTCTGGTTCCGGTTCGCCGCAGAGCCCCCTGCATTTAGCCACCAGATCTCGGGGAGGAACGTCCCCGGCTGAGGCTGATGACAGCATGGAAGATGATGAAGATGCAAAATCAGAAAGCTATAGCTGGAAAAGCCACACTCATCACAAACAAGTAAAAGTTGTTGATGTATAG 1401 0.4568 MGSVPAELSLDIRAPTPPPPPPPSTPSFIPKTITDFLSALSTTGITASEKQSRINGFLSHLEDEYNKIHAFKRELPLSMLLLSDAIVALKEELEKCSEGERKSEPVLEVFIPLKREFDHSEDDEEHNNNNNNNDNNNNNNNIRQEKECRDKMSWMSSVQLWNASSSTTLNNNNNNNAFDNNHKHHHQNHHHKFGTKKNQEYVVENPFQSHSNVRNNGGRGFMPFTSYTSCSVPVTTVALSATKEEKEDIGAINRLPLLTPAAAGGGVKTLREGSGSSGSRTSSNNRPVSTSSPPAAAHRTAMMPLQPQQTARKQRRCWSPELHRRFVNALQKLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLHTRRVPSGSGNHSHNHNQSVVVLGGLWMSQGQDQCNDSSKGSSSGSGSPQSPLHLATRSRGGTSPAEADDSMEDDEDAKSESYSWKSHTHHKQVKVVDV 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01628 466 SUPERFAMILY Homeodomain-like 310 371 IPR009057 -
Arst10g01628 466 MobiDBLite consensus disorder prediction 397 466 - -
Arst10g01628 466 MobiDBLite consensus disorder prediction 263 317 - -
Arst10g01628 466 Pfam Myb-like DNA-binding domain 315 366 IPR001005 -
Arst10g01628 466 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 45 454 IPR044787 GO:0003700|GO:0006355
Arst10g01628 466 Gene3D - 312 370 - -
Arst10g01628 466 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 310 370 IPR017930 -
Arst10g01628 466 MobiDBLite consensus disorder prediction 445 466 - -
Arst10g01628 466 MobiDBLite consensus disorder prediction 1 26 - -
Arst10g01628 466 NCBIfam myb-like DNA-binding domain, SHAQKYF class 313 368 IPR006447 GO:0003677
Arst10g01628 466 MobiDBLite consensus disorder prediction 119 142 - -
Arst10g01628 466 MobiDBLite consensus disorder prediction 272 296 - -
Arst10g01628 466 MobiDBLite consensus disorder prediction 12 26 - -
Arst10g01628 466 FunFam Myb family transcription factor 312 370 - -
Arst10g01628 466 MobiDBLite consensus disorder prediction 397 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01628 Arst-Chr10 31364455 31367590 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g01628 6 395 G2-like Transcription Factor Family AT2G03500 35.250 2.18e-48 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Arst10g01628 Myb_DNA-binding 4.4e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01628 - - adu:107470076 806.594