Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01620 ATGGAGTGCTATGGTGGGATGGGCAAGACAAACGGTTTGTCTCCAGATGAAAGTGAAAACGAGTTATGCCTTTCAAACAACAACGTTGTTGACAAGAATGACTTAAGAAAGGTTGAGTTGTTGTCGGATGAAGATGGTCGTGAATATGGTTACATGACTGGGTTGACTGCAGAGGACATAATGAAAAAGGTGTTTCAAAGTGAAGAGCATGCATATGAGTTTTATGGTAGGTTAGGGAAATGCAACGGATTTGGGGTCCGTAAGGGAGACTATGCAAAGGATGAAGATGGGAGTGTAGTGAGAAGGAGGTTCTTCTGTAATCGGGCTGGCCTAAGGGATGGAAAACACTACAACAAGCTAGACAGGAAGAGATGCCATAGGCCTGAGACACGCACGAATTGCCAGGCCCTGATGTCTGTATACCTTGATAAGGGTAGCTCGGTTTGGAAGGTTCGGAAAGTAATCCTCGTGCATAACCACGAGTTGATACCGACGGGAATGGTTCATATGATCCGAAGTTTCCGGGCGATATCGGATTCTGCAAAGGCCCACATGGATGGAATGCATACGTATGGGTTTCCGACATCTAAGATATTGGGGTACATGGCTGGGATTGCGGGTGGTTATTCTTCTTTGGGTTTTACCAAGAAAGACGCATAA 660 0.4561 MECYGGMGKTNGLSPDESENELCLSNNNVVDKNDLRKVELLSDEDGREYGYMTGLTAEDIMKKVFQSEEHAYEFYGRLGKCNGFGVRKGDYAKDEDGSVVRRRFFCNRAGLRDGKHYNKLDRKRCHRPETRTNCQALMSVYLDKGSSVWKVRKVILVHNHELIPTGMVHMIRSFRAISDSAKAHMDGMHTYGFPTSKILGYMAGIAGGYSSLGFTKKDA 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01620 219 Pfam FAR1 DNA-binding domain 73 163 IPR004330 -
Arst10g01620 219 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 17 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01620 Arst-Chr10 31051246 31051905 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Arst10g01620 FAR1 4.5e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01620 - - aip:107633916 392.504