Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01553 ATGGGACACAAAAGGAGCCCATGTTCTGTTGACCAAAGCAGTTATACTTCTATTGAATCTAAAAGGCAAAAGGCTAATGATTTATCAATCACCACAAAGGAGAGGAAGGAGAAGCTTAGTGAACGAATCGTTGCATTGCAGCAGCTTGTTTCACCATATGGCAAGACAGATACATCTTCTGTCTTAGAGGAAGCAATGCAATACATAGGTTTCCTTCATAAACAAGTTAAGCTTCTTAGTGCCCCGTACCTCGAGAGTTCGGCGGCAACCAAGGATCCGGGTCTGGAGCCATGCAGCCTGAGGAGCAGAGGGTTATGTCTTGTTCCTGTCTCACTAACAATTGGAGTTGCTGAGAGCAATGGTGCAGATATCTGGGCTCCCATCAAGACCACCACCTCGCCGCCGAAATTTGAGAAGGAGGCCGCCCAATTTCAGTCATAA 441 0.4649 MIASSFCNADSMFPREEGVDVRKMMGHKRSPCSVDQSSYTSIESKRQKANDLSITTKERKEKLSERIVALQQLVSPYGKTDTSSVLEEAMQYIGFLHKQVKLLSAPYLESSAATKDPGLEPCSLRSRGLCLVPVSLTIGVAESNGADIWAPIKTTTSPPKFEKEAAQFQS 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01553 170 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 36 137 - -
Arst10g01553 170 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 52 109 IPR036638 GO:0046983
Arst10g01553 170 Gene3D - 42 115 IPR036638 GO:0046983
Arst10g01553 170 CDD bHLH_AtbHLH_like 53 104 IPR045239 -
Arst10g01553 170 FunFam Transcription factor bHLH113 family 45 121 - -
Arst10g01553 170 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 47 96 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01553 Arst-Chr10 28749413 28753534 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g01553 24 161 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 58.696 1.02e-51 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01553 - - ahf:112715472 306.219