Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01543 ATGGCAGCTAGGTATGATCTCATCAAGTGTATCAATGCTGGTCCAGCGCATAAGGTGTGGAAGCTCAAAGTACGTGTCATTAGACTTTGGACCGTTTCTCAATTTGCAAGATCTGGGATGAAGGCACCTATTGAGATGGTTGTCCTTGATGAAGAGGGAGATACAATTCAATGCACTGTAAAAGACATATTTGTTCCTATTTTCGAGGGCTTACTCGCTGAGGGCAACGTGTACGTGGTCACTAATTTTGGAGTTGCTTTGAATACCATCAAGTTCAAGCCTACTAGACACGAATTTAGGATCCATTTCAAGAGGGACACGATTGTGCGTCCGGTACAAGATTCTTCAGTTCCATTGAACGGATTTAATTTTGTTCCGTTCAAAACAATACAATCAGAGTCTAAAGAAGATGGTTATTTAGTTGGGGTGGACAGAAATTAA 441 0.4127 MAARYDLIKCINAGPAHKVWKLKVRVIRLWTVSQFARSGMKAPIEMVVLDEEGDTIQCTVKDIFVPIFEGLLAEGNVYVVTNFGVALNTIKFKPTRHEFRIHFKRDTIVRPVQDSSVPLNGFNFVPFKTIQSESKEDGYLVGVDRN 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01543 146 Pfam Domain of unknown function DUF223 45 135 IPR003871 -
Arst10g01543 146 Gene3D - 8 115 IPR012340 -
Arst10g01543 146 SUPERFAMILY Nucleic acid-binding proteins 15 115 IPR012340 -
Arst10g01543 146 CDD RPA1_DBD_A_like 21 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01543 Arst-Chr10 28237906 28239865 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g01543 11 127 Core DNA Replication Machinery Family AT5G08020 23.333 4.56e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01543 - - aip:107647757 288.5