Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01530 ATGTGTTCAGGACTTCAGGTAATAGCATTAGCAAAGGTTAGAGTTGTGCAGACCTTGAAGGATCAAGGAGACAAGCAGGCAGCAGCCGTGACCGAGAGCGAGGAGCAGCAGATTCAGAGGACAAGTCACGACTCACAAGACCCAGGAGCCCAGGACCGAGACCAGCAGGCAGCAGCAACGACGGCCAGACAGAGGTCTTGGTTGTTTGTTGTGATGGTTGATGTGATGACTGATGTGATTGAGAAGGCAGTTTCTAACAAAATACAAACAACTGTTAAGAAGCAGCTCATAAATAGGTTTAAAGAGAGTATTATTGAGGGTCAAACATACTGGATGTCATATTTTAGTGTTGTTCCAAACCAAGGCAATTATAGGGCAGCAGAACATGAGTTTAAGTTGGCTTTTCTTAATCGTACAACTGTTATTCCTGTCTCTGACGATGATATCCCAAATACATGTTTCGATTTCTGTCCCTTTGATGAGCTCTTGAAAATGACTGAAGATTACATTTACTTAGTTGATGTTATTGGTTTGCTGACTTTTGTTGGTGAAGAGAAAGAGTATGTGAAAGATGCGAAAGTGATGAAGATGATCATTCTTGAGTTATCTTCAAAAGAGTTGACAATACGCTGTACTCTGTTTGGAGAGTATGTGGATGAAGTGCATCGTTTCTTAGGTTCTGGCTATATGGAGCAGCCAGTTGTTGTGATCCAACTTGCCAAAGTTAAATTCTTTAGGGGACAAGTTGGTCTCCAAAATGTTATGCATGCTACTCGGCTGTTCTTTAATCTAGATTTGTCTGAAATAGTTGATTTCAAAAATAGTATAATTGACCAAGGTATCAATGGAACACAGTCATTGTTTATTGCTAATGAGGGCAAGGGTGTTTCATTGGAAGATGATTTTATGCGGCTTACTAGAAGATGCACTATTAACGAACTTCATGATAACAACGAAGTTTATTGGGAGGGGTCTTTTGTGGTTTTTGGTTTTGTGAGATCTATTGTGGATGAGGGACCTTCGTGGTATTCAGCTTGTATTTGTGGGAAATATAGGATCAAAATAGCTGTTGAGGATGACAATGGACATGGCGTATTTGTGTTATTCGATCATGAAGCTGCTTACTTATTGAAAAAATCATGTGCTGATCTGTTTGGAGAAGTTCAGAAGGATGCAAATCAATTGGTGGGTAAAAAATTGCTCCTTAAGATAGATACCAAGAGTGTTGGTACAGACAAGTATTTTGAAACTTTCCGTGTGAGAAGAGTTTGTGATGATGCTGCTATTATTTCCATGTTTGAGTTGCCTAACTATGATGCCAATGATGAGCGTACTCCATTGAAGGATGGTAAGTTGGGAAAGATCCCTTCAAGTGAGGATGAACATATTGTTGACAAGAGGGAGCCCTGTGAGGTGCTGGATGAGACAAACTACAGGCCTTTGATTGATTTTCTTGGTGAAAAGGGTGCTAAAGTTCCTGGATTGGATGATATAAGTACTGAAATTGATATTGTAAGAGAGGCAGGGAAAAGTGTTGGTGATAGTGTACTTGTTGATGGGAAGTGCAGTCTTGAATTTTCCTCTATTGTTTATCGTATAAAAGGCTTATTTGTTCCTTTACTTGAATTTTTCAATGTGTCTTTTGCATTTGTGCTGAGAAGTACCTTACATGCTTGCGAATAA 1683 0.3957 MCSGLQVIALAKVRVVQTLKDQGDKQAAAVTESEEQQIQRTSHDSQDPGAQDRDQQAAATTARQRSWLFVVMVDVMTDVIEKAVSNKIQTTVKKQLINRFKESIIEGQTYWMSYFSVVPNQGNYRAAEHEFKLAFLNRTTVIPVSDDDIPNTCFDFCPFDELLKMTEDYIYLVDVIGLLTFVGEEKEYVKDAKVMKMIILELSSKELTIRCTLFGEYVDEVHRFLGSGYMEQPVVVIQLAKVKFFRGQVGLQNVMHATRLFFNLDLSEIVDFKNSIIDQGINGTQSLFIANEGKGVSLEDDFMRLTRRCTINELHDNNEVYWEGSFVVFGFVRSIVDEGPSWYSACICGKYRIKIAVEDDNGHGVFVLFDHEAAYLLKKSCADLFGEVQKDANQLVGKKLLLKIDTKSVGTDKYFETFRVRRVCDDAAIISMFELPNYDANDERTPLKDGKLGKIPSSEDEHIVDKREPCEVLDETNYRPLIDFLGEKGAKVPGLDDISTEIDIVREAGKSVGDSVLVDGKCSLEFSSIVYRIKGLFVPLLEFFNVSFAFVLRSTLHACE 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01530 560 Pfam Domain of unknown function DUF223 82 166 IPR003871 -
Arst10g01530 560 Gene3D - 347 434 IPR012340 -
Arst10g01530 560 MobiDBLite consensus disorder prediction 27 57 - -
Arst10g01530 560 SUPERFAMILY Nucleic acid-binding proteins 154 276 IPR012340 -
Arst10g01530 560 CDD RPA1_DBD_B_like 174 273 - -
Arst10g01530 560 CDD RPA1_DBD_A_like 86 141 - -
Arst10g01530 560 Gene3D - 148 285 IPR012340 -
Arst10g01530 560 Gene3D - 6 147 IPR012340 -
Arst10g01530 560 SUPERFAMILY Nucleic acid-binding proteins 85 147 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01530 Arst-Chr10 27691689 27697838 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g01530 87 292 Core DNA Replication Machinery Family AT2G06510 27.315 9.11e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01530 - - adu:107469618 1089.72