Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01526 ATGGTTGATTTGATGTTTGAGAGAAGGGGTGGAGTGGTTGATGTTATCATCCCTGGATATGAGGAAGATTTCAAATGTAAGATCATTCCTCCACGTGAGGCCTGGAGGATCAAAGTCAGGGTACTAAGGGCTTGGACTGTACCTAGCTTTGGTAATGCAGATGTTCCAAATTCAATGGAACTTATTCTGGTTGATGAAAATTCTACCAAAATCCAGGCCACTGTAAGGAAGCAACTAATACACAAGTTTAAAGATCATCTTCTTGAAGGCAGTTGTTATAAGATGAGTTATTTTGCTGTTGTTTCAAACCAAGGCTCTTATAGAGCTACAAAGCATGAGTTCAAACTCATTTTTCTATTTCGTACAACAGTGACAACAATTCCTGATGATATAATACCCAAGTCTTGTTTTTCTATATATCCCTTTGAAGACATATTGCAAATGAGTCAGGATCATGACTATTTAGTTGATGTAATTGGTCTTTTGACATTGGTTGGGGAAGAGAAAAACTATGACAGGGATGGTAAAACGGTTAAGATGGTTGTTGTCGAACTTTCTTCACAAAAGATGATGCTGCGATGCGCATTATTTGGAGAGTACGTGGACCAGTTAAATGATTTTCTTGCTTCTGGTTATGTTGAGCAACCGGTTGTCATTGTTCAACTTGCTAAGATTAAACTTTTTCGAGGTCAACCTGGTCTCCAGAATGTTATGAAAGCAACAAAAATTTACTTTAATCCTGATTTGTCAGAAGTTATTGATTTTCGAAAAAGCATGGTCGAACAAGGAATTAATGGCACTCAACCTTTATTCATTGCGAATGAGGGAAAATCCGTTTCATTGGAGGATGACTTCATGCGCCTAACTAGGCGATCCACAATAGATCAATTACATGATAACAAAGAGGATGGGAGTTTTGTTATTATGGGTACTATCACTGATATTGTTGAAGAGGGCTGTTGGTGGTATTCCACTTGTGTGTGTGGAAAGGCAGTTTATCCTGAGTCTGGGGTCTATTTCTGTGATCTTTGCATGCATCATGTGACAAATGTGATTCCAAGGTTCAGACTTAAAGTAGCAGTTTCTGATCATACTGGACAGGGCATATTCATTTTGTTTGATCGTGAAACAGCTTATTTGCTTAAAAAAGCATGTGCTGACCTTTTTAATGAAGTCCAAAAGGAGCCAACTGTTCTGTGTGGAGATAGCTATCCTATTACATTTAAAACTTTAGAGGGTAAAAAAGTTATACTAAAAGTAGATACCAAGTCCCTTGGTATAGACAAATACTTTGGAACCTTTCGTGTAAAAAGGATATGTGATGACCCAACTATTATTTCTATGTTTGAGCTTGCTGAGAATGAGAACGAAGTGACACCTGTCAAGGATGCACATGTTCCTGGGATTGGTTTGGACATAGGTGAACCCTCTTATACATAG 1440 0.3806 MVDLMFERRGGVVDVIIPGYEEDFKCKIIPPREAWRIKVRVLRAWTVPSFGNADVPNSMELILVDENSTKIQATVRKQLIHKFKDHLLEGSCYKMSYFAVVSNQGSYRATKHEFKLIFLFRTTVTTIPDDIIPKSCFSIYPFEDILQMSQDHDYLVDVIGLLTLVGEEKNYDRDGKTVKMVVVELSSQKMMLRCALFGEYVDQLNDFLASGYVEQPVVIVQLAKIKLFRGQPGLQNVMKATKIYFNPDLSEVIDFRKSMVEQGINGTQPLFIANEGKSVSLEDDFMRLTRRSTIDQLHDNKEDGSFVIMGTITDIVEEGCWWYSTCVCGKAVYPESGVYFCDLCMHHVTNVIPRFRLKVAVSDHTGQGIFILFDRETAYLLKKACADLFNEVQKEPTVLCGDSYPITFKTLEGKKVILKVDTKSLGIDKYFGTFRVKRICDDPTIISMFELAENENEVTPVKDAHVPGIGLDIGEPSYT 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01526 479 CDD RPA1_DBD_B_like 157 259 - -
Arst10g01526 479 CDD RPA1_DBD_C 296 437 IPR047192 -
Arst10g01526 479 Pfam Replication factor-A C terminal domain 307 396 IPR013955 -
Arst10g01526 479 SUPERFAMILY Nucleic acid-binding proteins 289 442 IPR012340 -
Arst10g01526 479 PANTHER OS03G0429900 PROTEIN 32 429 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Arst10g01526 479 SUPERFAMILY Nucleic acid-binding proteins 28 130 IPR012340 -
Arst10g01526 479 CDD RPA1_DBD_A_like 36 124 - -
Arst10g01526 479 Gene3D - 280 444 IPR012340 -
Arst10g01526 479 Pfam Domain of unknown function DUF223 60 155 IPR003871 -
Arst10g01526 479 SUPERFAMILY Nucleic acid-binding proteins 137 259 IPR012340 -
Arst10g01526 479 Gene3D - 131 267 IPR012340 -
Arst10g01526 479 Gene3D - 26 129 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01526 Arst-Chr10 27545643 27548327 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g01526 30 366 Core DNA Replication Machinery Family AT2G06510 23.481 1.27e-16 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01526 - - adu:110276578 967.607