Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01476 ATGCCTTCTTCGTCTGCACCAATTACTATAATCTCAAGATGCACCGTTGTCCCTCACAAACCCTCAACACTCAACGACCTCAAGCTTTCAATCTCAGACCTCAACATGCTCTCTTGTCACTACATCCAAAAGGGATGTATCTACGCTGCACCCTCACTCCCTCAAACCACTCTAATCCAATCCCTTAAAACCTCACTCTCACAAACCCTCTCCATCTTCCCTCCCCTCGCCGGAACCTTCCGAACCTCAGATTCCGGACATGTCTACGTCCATTCTAATGACTCCGGCGTCCATTTCATCCACGCCGCGGCTTCTGCAGTTTCTGTCTCCGACCTCTTGTCCTCAAAGGACGTCCCCAACACCTTCCAACAACTCTTCCCCTTCCACAAGAAACTAAACTACACCGCTCATTTCTCTCCGATCATGGCCGTTCAGGTCACCGAACTCGCCGATGGTGTCTTCATCGGCGTCGCCGTCAACCATGCCGTCACCGACGGAGCCTCCCTCTGGCACTTCTTCAACACCTTCGCTGAATTCTCCAGAGGAGCCGCATCGCCATCGAGGCTCCCGGACTTCCGCCGGGACTCAATTCTGGTCTCCGAAGCCGTCCTCCGGCTACCGGACGGCGACCTTAAGGTCTCCTTCAATGCCAACGAGACCTTGCGCGAGAGGATCTTCGGCTTCAGCCGTGAATCCATTCGGAGGCTGAAAGCAGAAGCAAACCGCCGCGCACCGCCGGAGAATCAAATCTGCAGCGATGACGGCGGCTCCGCCGTTGAGTTGATGGCGAAGATGAGCAACGACACGAAATTGGAAACGGTTACTGGAAACAAACCAAATAGTGAAATCGTTGAGATCTCGTCCTTTCAGTCCCTCTGCGTGCTGACTTGGCGTGCGGTTACGCGTGCTAGGAAGATTCCGTTATCCAAATCGACGACATTTAGAATGGCGGTTAACGTTCGCAGCAGAATGGAGCCGAAGCTTGGGGATAACTACTTTGGAAACGCGATTCAGAGCTTTGCCACGTGTGCGACCGCGGAAGAAGTAGTGTGCAGGGACCTTTCGTGGAGCGCAAAGCAGCTGAACAAGAGCGTGAGGGCGTACGATAGCGATGCGGTGAAGCGCGCCATAGAGGATTGGGAGTGCGAGCCACAGTGCTTCGCTTTGGGGAACCACGACGGCGCCACGGTGCAGATGGGGAGCTCTCCGCGGTTTCCTATGTTCGATAATGATTTCGGGTGGGGGAAACCAGTGGCTGTGAGGAGCGGCGCCGCCAATAAGTTCGACGGAAAGATGTCGGCATTTCCTGGGAGGGATGGCGGCGGTTCCGTGGACTTGGAGGTGGTCTTGGCGCCCGATGCTATGGCGGCTCTTGAGTGTGACGACGAGTTCATGCTCTATGCATCTGGTTGA 1413 0.5506 MPSSSAPITIISRCTVVPHKPSTLNDLKLSISDLNMLSCHYIQKGCIYAAPSLPQTTLIQSLKTSLSQTLSIFPPLAGTFRTSDSGHVYVHSNDSGVHFIHAAASAVSVSDLLSSKDVPNTFQQLFPFHKKLNYTAHFSPIMAVQVTELADGVFIGVAVNHAVTDGASLWHFFNTFAEFSRGAASPSRLPDFRRDSILVSEAVLRLPDGDLKVSFNANETLRERIFGFSRESIRRLKAEANRRAPPENQICSDDGGSAVELMAKMSNDTKLETVTGNKPNSEIVEISSFQSLCVLTWRAVTRARKIPLSKSTTFRMAVNVRSRMEPKLGDNYFGNAIQSFATCATAEEVVCRDLSWSAKQLNKSVRAYDSDAVKRAIEDWECEPQCFALGNHDGATVQMGSSPRFPMFDNDFGWGKPVAVRSGAANKFDGKMSAFPGRDGGGSVDLEVVLAPDAMAALECDDEFMLYASG 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01476 470 Gene3D - 212 460 IPR023213 -
Arst10g01476 470 SUPERFAMILY CoA-dependent acyltransferases 47 187 - -
Arst10g01476 470 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 10 465 - -
Arst10g01476 470 Pfam Transferase family 7 465 - -
Arst10g01476 470 Gene3D - 8 205 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01476 Arst-Chr10 25805344 25807256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g01476 60 459 Monolignol Biosynthesis Gene Families AT5G48930 26.536 2.00e-35 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01476 - - gmx:100792476 607.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g01476 10 25805344 25807256 Arst10g01476 10 25805344 25807256 ECH
Arst10g01476 10 25805344 25807256 Arst7g01194 7 11014953 11016757 ECH
Arst7g01194 7 11014953 11016757 Arst10g01476 10 25805344 25807256 PCT