Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01474 ATGGAAGAAAGCATGTCAGGCTTTTGCATAAGCGACGGAAGAGGAAGTGTTGCTAATAACAATAATAGTGGCGGAAGTGGAACAAAGTGTGGGCGTTGGAACCCAACAACCGAACAAGTGAAGGTTCTGACAGAACTTTTCAGCTCTGGACTCAGAACTCCAAGCACCGATCAGATTCAGAGGATCTCTAATCAGCTCAGTTTCTATGGCAAAATTGAAAGCAAGAATGTCTTCTATTGGTTTCAGAATCATAAGGCTAGGGAGAGACAGAAAAGAAGAAGGCTTTCTTTTGATCATGATCATGGAGGTGGTGGAGTTGGAGATAATCATAGCACCATCAATATTAATCATTCTTCTACACAAAGTTTTGCACAGCTGTATTCAGAATCAGAGAAGGTGATTGAGACTCTTCAACTATTTCCATTGAACTCCTTTGGTGAATCAGAATCATCAGACAAGCTGAGTAGTAGGGTGCATGCAAATGATCAATGCCGGGATAATAATAATTTGATGTTCTCTTACACCATGGGGGAACAAATTGATCACCCTCCATTAGACCTTCGCTTAAGTTTCATGTAA 579 0.4076 MEESMSGFCISDGRGSVANNNNSGGSGTKCGRWNPTTEQVKVLTELFSSGLRTPSTDQIQRISNQLSFYGKIESKNVFYWFQNHKARERQKRRRLSFDHDHGGGGVGDNHSTININHSSTQSFAQLYSESEKVIETLQLFPLNSFGESESSDKLSSRVHANDQCRDNNNLMFSYTMGEQIDHPPLDLRLSFM 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01474 192 SMART HOX_1 28 95 IPR001356 GO:0003677
Arst10g01474 192 MobiDBLite consensus disorder prediction 13 33 - -
Arst10g01474 192 Gene3D - 29 97 - -
Arst10g01474 192 FunFam WUSCHEL-related homeobox 11 29 97 - -
Arst10g01474 192 ProSiteProfiles 'Homeobox' domain profile. 26 91 IPR001356 GO:0003677
Arst10g01474 192 MobiDBLite consensus disorder prediction 11 33 - -
Arst10g01474 192 CDD homeodomain 32 92 IPR001356 GO:0003677
Arst10g01474 192 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 18 106 IPR044555 GO:0003700|GO:0099402
Arst10g01474 192 Pfam Homeodomain 30 90 IPR001356 GO:0003677
Arst10g01474 192 SUPERFAMILY Homeodomain-like 31 93 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01474 Arst-Chr10 25767995 25769428 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g01474 14 192 Wox Gene Family AT3G11260 56.085 8.76e-63 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Arst10g01474 Homeodomain 2.3e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01474 - - adu:107469676 372.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g01474 10 25767995 25769428 Arst7g01192 7 10998251 10999646 ECH
Arst10g01474 10 25767995 25769428 Arst10g01474 10 25767995 25769428 ECH
Arst10g01474 10 25767995 25769428 Arst7g01192 7 10998251 10999646 PCT