Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01473 ATGGAAGAAAGCATGTCAGGCTTTTGCATAAGCGACGGAAGAGGAAGTGTTGCTAATAACAATAATAGTGGCGGAAGTGGAACAAAGTGTGGGCGTTGGAACCCAACAACCGAACAAGTGAAGGTTCTGACAGAACTTTTCAGCTCTGGACTCAGAACTCCAAGCACCGATCAGATTCAGAGGATCTCTAATCAGCTCAGTTTCTATGGCAAAATTGAAAGCAAGAATGTCTTCTATTGGTTTCAGAATCATAAGGCTAGGGAGAGACAGAAAAGAAGAAGGCTTTCTTTTGATCATGATCATGGAGGTGGTGGAGTTGGAGATAATCATAGCACCATCAATATTAATCATTCTTCTACACAAACAGGTTTTGCACAGCTGTATTCAGAATCAGAGAAGGTGATTGAGACTCTTCAACTATTTCCATTGAACTCCTTTGGTGAATCAGAATCATCAGACAAGCTGAGTAGTAGGGTGCATGCAAATGATCAATGCCGGGATAATAATAATTTGATGTTCTCTTACACCATGGGGGAACAAATTGATCACCCTCCATTAGACCTTCGCTTAAGTTTCATGTAA 582 0.4089 MEESMSGFCISDGRGSVANNNNSGGSGTKCGRWNPTTEQVKVLTELFSSGLRTPSTDQIQRISNQLSFYGKIESKNVFYWFQNHKARERQKRRRLSFDHDHGGGGVGDNHSTININHSSTQTGFAQLYSESEKVIETLQLFPLNSFGESESSDKLSSRVHANDQCRDNNNLMFSYTMGEQIDHPPLDLRLSFM 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01473 193 SMART HOX_1 28 95 IPR001356 GO:0003677
Arst10g01473 193 MobiDBLite consensus disorder prediction 13 33 - -
Arst10g01473 193 Gene3D - 29 97 - -
Arst10g01473 193 FunFam WUSCHEL-related homeobox 11 29 97 - -
Arst10g01473 193 ProSiteProfiles 'Homeobox' domain profile. 26 91 IPR001356 GO:0003677
Arst10g01473 193 Pfam Homeodomain 30 90 IPR001356 GO:0003677
Arst10g01473 193 MobiDBLite consensus disorder prediction 11 33 - -
Arst10g01473 193 CDD homeodomain 32 92 IPR001356 GO:0003677
Arst10g01473 193 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 18 104 IPR044555 GO:0003700|GO:0099402
Arst10g01473 193 SUPERFAMILY Homeodomain-like 31 93 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01473 Arst-Chr10 25767995 25769428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g01473 14 193 Wox Gene Family AT3G11260 55.789 1.39e-62 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Arst10g01473 Homeodomain 2.3e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01473 - - adu:107469676 380.948