Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01410 ATGGCATCCAGAGCCACTGGAACACTGATTTGTTCTTGCATGATATGGCTCTTCCTTCTCTGCGCAACCATCGCGTTCCTTCAGCTCAAGTTGGTGGATGACTCAGCACATCGAGCTTCCTCTAATAGAAAAATAACCACTCATCACTCCGCAACTGATGACCTAGATGGAGAAAATTTGGAGGGTGTGACGCATAAGGTGTATTTTGATGTTCAGATTGGTGGAAAATTAGCCGGTCGCATAGTCATGGGCCTTTTTGGGAAGACAGTTCCGAAAACTGTAGAAAACTTCAGAGCGCTTTGCACTGGAGAGAAGGGGGTTGGAAAAAGTGGGAAGCCTCTTCACTATAAAGGGAGCGTATTCCATCGGATTATACCAAGCTTTATGGTCCAAGGTGGTGATTTCACACGAGGTGATGGACGAGGTGGAGAATCGATCTATGGTGATAAGTTTGCTGATGAAAACTTCAAGGTGAAGCATGATGGGCCAGGGTACTTGTCAATGGCGAATTCCGGGCAAGATACCAATGGCTCGCAGTTTTTCATCACAACAGTTGGATGGACGCCATGTTGTATTTGGCAAGGTACTTTCAGGAATAGACATTCTGTACAAGATTGA 618 0.4563 MASRATGTLICSCMIWLFLLCATIAFLQLKLVDDSAHRASSNRKITTHHSATDDLDGENLEGVTHKVYFDVQIGGKLAGRIVMGLFGKTVPKTVENFRALCTGEKGVGKSGKPLHYKGSVFHRIIPSFMVQGGDFTRGDGRGGESIYGDKFADENFKVKHDGPGYLSMANSGQDTNGSQFFITTVGWTPCCIWQGTFRNRHSVQD 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01410 205 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 116 133 IPR020892 GO:0003755|GO:0006457
Arst10g01410 205 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 66 185 - -
Arst10g01410 205 FunFam Peptidyl-prolyl cis-trans isomerase CYP19-2 60 191 - -
Arst10g01410 205 SUPERFAMILY Cyclophilin-like 63 186 IPR029000 -
Arst10g01410 205 Gene3D - 53 196 IPR029000 -
Arst10g01410 205 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 69 185 IPR002130 GO:0000413|GO:0003755
Arst10g01410 205 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 68 205 IPR002130 GO:0000413|GO:0003755
Arst10g01410 205 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 85 100 IPR002130 GO:0000413|GO:0003755
Arst10g01410 205 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 179 191 IPR002130 GO:0000413|GO:0003755
Arst10g01410 205 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 164 179 IPR002130 GO:0000413|GO:0003755
Arst10g01410 205 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 121 133 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01410 Arst-Chr10 23144089 23148563 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g01410 79 182 U-box Gene Family AT5G67530 49.524 1.17e-20 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01410 K01802 - gmx:100798499 290.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g01410 10 23144089 23148563 Arst10g01410 10 23144089 23148563 ECH