Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01402 ATGCATGACTCAGATGGTGTGGACAAGTTGTTAATGTTGTTTGGAACCATCGAAAGCATTGGTGATGGATTGCAGAACCCTCTTATGATGTATATTCTTAGTGATGTCATCAATGCTTATGGAGATAAGAATTCCAAATTGGGTATGCATGATGTGAACAAGTATGCATTGAGGCTTTTATTAGTTGCAATTGGTGTTGGACTTTCAGCTTTTGTAGAAGGAATGTGTTGGGCAAGAACTGCAGAGAGACAGGCTTCAAGAATGAGAATGGAATATTTGAAATCAGTGCTGAGACAAGAAATTGGATTCTTTGATAGCCAGACAGCTGGTACTTCAACAACTTACCAAGTTGTCTCACTCATCTCCTCAGATGCCAATACCATCCAAGTTGCCTTGTGTGAGAAGGAGAACATACCTATTGAGGAGGTTTTTGAGAACCTGAGATGTAGTAGAGAAGGTCTCAGCAGCAAGGCTGCTGAGGAAAGACTCGCCATTTTTGGCCACAACAAGCCTTATTTTACAGATAATGCTGCTGCAGCTCTCATGGCTCGTCTCGCTCCAAAAGCAAAGGTGTGTCTGGATCAATTAGCAGTCAATATTTGGAGTCCATGTGGAGCACAGTGGTAA 627 0.4211 MHDSDGVDKLLMLFGTIESIGDGLQNPLMMYILSDVINAYGDKNSKLGMHDVNKYALRLLLVAIGVGLSAFVEGMCWARTAERQASRMRMEYLKSVLRQEIGFFDSQTAGTSTTYQVVSLISSDANTIQVALCEKENIPIEEVFENLRCSREGLSSKAAEERLAIFGHNKPYFTDNAAAALMARLAPKAKVCLDQLAVNIWSPCGAQW 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01402 208 Gene3D ABC transporter type 1, transmembrane domain 1 145 IPR036640 GO:0005524|GO:0016020
Arst10g01402 208 PANTHER ABC TRANSPORTER B FAMILY 5 143 IPR039421 -
Arst10g01402 208 SUPERFAMILY ABC transporter transmembrane region 8 132 IPR036640 GO:0005524|GO:0016020
Arst10g01402 208 Pfam ABC transporter transmembrane region 13 132 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst10g01402 208 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 26 132 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst10g01402 208 SUPERFAMILY Calcium ATPase, transmembrane domain M 136 170 IPR023298 -
Arst10g01402 208 Pfam Cation transporter/ATPase, N-terminus 137 170 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01402 Arst-Chr10 22985497 22990139 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g01402 13 141 Calmodulin-binding Proteins AT2G36910 22.556 7.46e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01402 K05658 - adu:107469479 410.223