Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01397 ATGATGACACCACTTTCCTCCTCCGAAATCCTTCGTCTCTCCGCCGCGGTGATATTCACGCTCTCTCTACTGATCCCCACTTCCCATGCTCTCGGCTCCGGCGCTACCCTTGCCGTCACCGACGCCTCCGACACCGTCTGCGGCGTCGTCGCGGGGGAATCCACCCAACGCATTGAGTGCTCCCGCCTCGGTAGTCAGCTTGTCCCCGCCGTTCCCCCTAACATCTCATTCTCCACCGTCTCCGGCGGCGCCACCTTCTTCTGCGGCCTCAGGTCCGGCAACCGCACCTTGCTCTGTTGGAACACCATCACCACCACCAACGGAACCTTCACACCAAAGAGACTCTACAACAACGACACTGTTCTATTGGAGAATCTCGCCGTCGGAGAAACCCACGTTTGCGCCACCGTGGTCGGCGCCGGAACCGTTACGTGCTGGAGAACCAGCAAAACGTTCAAGTCCCCATCTAGGTCTCTTCAATTCTCTTCAATCTCATCTGGGTCAGGATTCTCTTGCGGGATTCTGAAGAACAGTTCTCAAGTTCGATGTTGGGGTGAAACGGTAATTTCAAGAGTGATTGAAAATGGGTTTAAGAACATGTCTATGTGGAGCATTGTCGCTGGTGGTTCACACGTTTGTGGGTTGAATTCAACTGGATTTCTGGTTTGCATAGGGGACAACGACAATTTTGGGCAACTTGATGTTCCAAAAAATGAAGCTTGGGAATTTGGTGAATTAGCACTTGGTGCTAGCCATGGATGTGCTTTGAGAAGGTTGAATGGAACTGGAAGCGTTGTTTGTTGGGGTGGTGATGGTAATTTCACATCGGAAGTAACAAAAGGTGTTTCCTTCGAGGTAATTGTTTCTGGGTCTAACTTCACTTGTGGATTAGTGACACGTAATCTTAGTGTTCTTTGTTGGGGTCCTGGTTGGCCTAATAATAATGGTTCAAGATTTGAACTTCCATTGCCTAGTGTTCTTCCGGGTCCTTGTGTTCAATCCTCTTGTGATAATTGTGGTCCATATCCTGATTCTCAATCTCTGTGTTCCGATTCTGATAGCAACATTTGCAAGCCTTGTTGGCCTCCAATTCAAGCTCCACCAGCGGCAACGGTTCCATCTTCGCTGCCGCCGGGGCCTGCTCCTCGGCAGAGGTCGCGGTCGAGGACATTGACTAGGGGTTTATTGGCATTTGCTATTGTTGGATCAGTTGGTGCTGTTGCTGGAATTTGCACAATTGTTTATTGTTTGTGGAATGGTGTTTGTTTTGGGAAGAAGAAAGTGCACAATTCTGTGCAGCCAACAATCACAAGAGGTAGTAGTACTTCAAGTGGTGTTTCCAACAATAGTAGGAACAATAGCAGGCCTCTTTCGAGGACTTCCACGATTATGCGACAAGGTTCGAGGATAATGCGCCGCCAGAGGAGTGGCACCTCATCCACAAAACACCCTGATAGGGCTGAGGAATTCGCCTTGGCCGAGCTAATAGCTGCAACGGACAATTTCTCGCCTGAGAACAAGATTGGGGCTGGAAGCTTTGGAGTTGTGTACAGGGGAAAGCTTGTGGACGGCCGTGAGGTGGCGATCAAGAGGGGCGAAACTGGCTCTAAATTGAAGAAGTTTCAAGAGAAAGAAAGCGCGTTTCAGTCCGAATTGTCCTTTTTGTCGCGGCTACACCACAAGCACTTGGTTAGGCTAGTTGGTTTCTGTGAGGAGAAAGAGGAGAGGCTCTTGGTTTATGATTACATGAAGAATGGTGCATTGTATGATCATTTGCACGCCAAGAACAATGTGGAGAAGAGTAGCAGTGTCTTGAATTCGTGGAAAATGAGGATCAAAATCGCCTTGGACGCCTCTCGGGGGATAGAATATCTCCACAATTATGCGGTTCCATCCATAATCCATAGAGATATCAAGTCTTCCAACATCCTCCTCGATGCAAATTGGACTGCTAGAGTATCCGATTTTGGATTGTCTTTGATGAGTCCAGAGCCAGACCGTGATCATCGGCCGATGAAGGCAGCTGGAACGGTTGGATATATTGATCCTGAGTACTATGGCCTAAATGTGATAACGGCAAAGAGTGATGTCTACGGCTTTGGAGTAGTTCTTTTAGAACTATTAACCGGAAAGCGAGCGATATTCAAGAATGGCGAAGATGGCGACACACCAATGAGTGTGGTGGACTTCGCCGTGCCTGCAATTTTGAGTGAGGAATTGGCGAAGATTTTGGACCCTAGGGTTGGACCACCAGATGCAAATGAAGCTGAGGCAGTGGAATTGATGGCAAAGATTGCAATGCTTTGTGTGAATTTGGAAGGAAAAGATAGACCAACCATTTCTGATATTGTTACCAATTTAGAGCGTGCATTGCTTCTTTGTGAAGGTTCTCATCATCATGATAGCAATTCGAGTGGTATAATCTCCATTGTCTCAGATTGA 2442 0.4808 MMTPLSSSEILRLSAAVIFTLSLLIPTSHALGSGATLAVTDASDTVCGVVAGESTQRIECSRLGSQLVPAVPPNISFSTVSGGATFFCGLRSGNRTLLCWNTITTTNGTFTPKRLYNNDTVLLENLAVGETHVCATVVGAGTVTCWRTSKTFKSPSRSLQFSSISSGSGFSCGILKNSSQVRCWGETVISRVIENGFKNMSMWSIVAGGSHVCGLNSTGFLVCIGDNDNFGQLDVPKNEAWEFGELALGASHGCALRRLNGTGSVVCWGGDGNFTSEVTKGVSFEVIVSGSNFTCGLVTRNLSVLCWGPGWPNNNGSRFELPLPSVLPGPCVQSSCDNCGPYPDSQSLCSDSDSNICKPCWPPIQAPPAATVPSSLPPGPAPRQRSRSRTLTRGLLAFAIVGSVGAVAGICTIVYCLWNGVCFGKKKVHNSVQPTITRGSSTSSGVSNNSRNNSRPLSRTSTIMRQGSRIMRRQRSGTSSTKHPDRAEEFALAELIAATDNFSPENKIGAGSFGVVYRGKLVDGREVAIKRGETGSKLKKFQEKESAFQSELSFLSRLHHKHLVRLVGFCEEKEERLLVYDYMKNGALYDHLHAKNNVEKSSSVLNSWKMRIKIALDASRGIEYLHNYAVPSIIHRDIKSSNILLDANWTARVSDFGLSLMSPEPDRDHRPMKAAGTVGYIDPEYYGLNVITAKSDVYGFGVVLLELLTGKRAIFKNGEDGDTPMSVVDFAVPAILSEELAKILDPRVGPPDANEAEAVELMAKIAMLCVNLEGKDRPTISDIVTNLERALLLCEGSHHHDSNSSGIISIVSD 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01397 813 CDD STKc_IRAK 508 789 - -
Arst10g01397 813 ProSitePatterns Serine/Threonine protein kinases active-site signature. 633 645 IPR008271 GO:0004672|GO:0006468
Arst10g01397 813 Gene3D Transferase(Phosphotransferase) domain 1 583 804 - -
Arst10g01397 813 FunFam Serine/threonine-protein kinase-like protein CCR4 583 806 - -
Arst10g01397 813 Gene3D - 25 199 IPR009091 -
Arst10g01397 813 Gene3D - 200 352 IPR009091 -
Arst10g01397 813 SMART serkin_6 502 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g01397 813 MobiDBLite consensus disorder prediction 434 484 - -
Arst10g01397 813 ProSitePatterns Protein kinases ATP-binding region signature. 508 530 IPR017441 GO:0005524
Arst10g01397 813 Pfam Protein kinase domain 504 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g01397 813 ProSiteProfiles Protein kinase domain profile. 502 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g01397 813 MobiDBLite consensus disorder prediction 434 477 - -
Arst10g01397 813 SUPERFAMILY Protein kinase-like (PK-like) 480 787 IPR011009 -
Arst10g01397 813 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 199 798 IPR044815 GO:0004674
Arst10g01397 813 Gene3D Phosphorylase Kinase; domain 1 463 582 - -
Arst10g01397 813 SUPERFAMILY RCC1/BLIP-II 68 310 IPR009091 -
Arst10g01397 813 FunFam serine/threonine-protein kinase-like protein CCR1 471 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01397 Arst-Chr10 22771851 22774735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g01397 1 813 Receptor kinase-like Gene Family AT3G55950 58.592 0.0 854
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Arst10g01397 Pkinase 2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01397 - - gmx:100786639 1109.75