Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01371 ATGGAGAATTATGATCATTGTTCTTTATTTCTAGACCCTTCACAAACACTGCCTCATGTCTCAGATTGTAATTCTCTTCATCATCAATTTGGTGGTGAGTTTCATTCATGGCCGGCACCGGTCGAAATGGTGGCCGGAGACAGAGCTGCTAGTGCTTCCAAGAGCCATAGTCAGGCCGAGAAGCGGCGCAGGGACCGGATCAATGCACAGCTTACAAGTCTAAGGAAACTAATTCCAAAATCTGATAAGATGGACAAGGCAGCTTTACTAGGAAGTGTGATAGAGCAAGTGAAGGATCTAAAGAGAAAAGCAATTGAAGTTAGCAAAGCCATAACCGTTCCAACTGAATCCGACGAAATAACAATCGAATATGATCCCAGTGCGCGTGACGAGAGCCTAAAGATGAAGAACAAAGTTGTGATCAAGGCATCTGTTTGCTGCGACGATCGGCCGGAGCTGTTCTCGGAACTAATCCAAGTCCTAAAAGGATTAAGGCTGACGGCAGTTAGAGCTGACATAGCAAGTGTTGGTGGAAGAATGAAAGGCACATTTTTGCTTTGTTCTAAGGATAATGAAAAGGTTGTTTGCCTTGGTACTCTCAAGCATTCACTTAAATCAGTTGTGACAAAAATTGCTTCATCTTCCATTGCAACAAATTGGCCTACTAGAAGTCCATATTGA 681 0.4332 MENYDHCSLFLDPSQTLPHVSDCNSLHHQFGGEFHSWPAPVEMVAGDRAASASKSHSQAEKRRRDRINAQLTSLRKLIPKSDKMDKAALLGSVIEQVKDLKRKAIEVSKAITVPTESDEITIEYDPSARDESLKMKNKVVIKASVCCDDRPELFSELIQVLKGLRLTAVRADIASVGGRMKGTFLLCSKDNEKVVCLGTLKHSLKSVVTKIASSSIATNWPTRSPY 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01371 226 PANTHER TRANSCRIPTION FACTOR BHLH30 41 214 IPR045847 GO:0003700|GO:0006355
Arst10g01371 226 Pfam Helix-loop-helix DNA-binding domain 54 100 IPR011598 GO:0046983
Arst10g01371 226 SMART finulus 57 106 IPR011598 GO:0046983
Arst10g01371 226 Gene3D - 46 109 IPR036638 GO:0046983
Arst10g01371 226 CDD bHLH_AtAIG1_like 47 122 - -
Arst10g01371 226 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 51 100 IPR011598 GO:0046983
Arst10g01371 226 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 52 103 IPR036638 GO:0046983
Arst10g01371 226 CDD ACT_UUR-ACR-like 144 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01371 Arst-Chr10 21031742 21033670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g01371 30 211 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 48.663 3.75e-49 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst10g01371 HLH 4.6e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01371 - - adu:107469423 443.736