Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01369 ATGTCAACACAACACGATTCTCGCTCTATAAACTGGCACTACACTGAGCTAGATGACAAAGACCTTGAAATCCGTGGCAAAACACTCTTCTTCGTCATCGTTCTCTTCTCCATTATACTCCTCACCACTGTCTTCTTCCTCTACACGCGCTGGGTCTGCCGCTACAACCACCACCACCGCTCCTCCGCCGCCCACGCGCGCCACGCGCCGCAGTCATCACTTCCTTCCCAGGGTCTTGACCAGGCGTCCATAAAGAAACTTCCGATCATCCTCCATCAGGCGCCAGCGGAGCCCCACGGCGGCGCGTGGGAGGAGACGGAGTGTTGCATCTGCCTGGGCGAGTTCGTCGACGGCGAGAAGCTGAAGGTTCTTCCGGCGTGTGAACACTATTTCCATTGTGAATGCGTTGATAAGTGGCTAATGCAACATTCTAGTTGCCCACTTTGTAGGGCTTCACTCAAACTTGAATCTTCGTTACCAAAGATTTTGATTCAAGAACCTCCCATTAGAATTGACATCCAATTTTAA 528 0.517 MSTQHDSRSINWHYTELDDKDLEIRGKTLFFVIVLFSIILLTTVFFLYTRWVCRYNHHHRSSAAHARHAPQSSLPSQGLDQASIKKLPIILHQAPAEPHGGAWEETECCICLGEFVDGEKLKVLPACEHYFHCECVDKWLMQHSSCPLCRASLKLESSLPKILIQEPPIRIDIQF 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01369 175 FunFam RING-H2 finger protein ATL66 71 155 - -
Arst10g01369 175 SUPERFAMILY RING/U-box 103 156 - -
Arst10g01369 175 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 63 155 IPR013083 -
Arst10g01369 175 Pfam Ring finger domain 107 150 IPR001841 -
Arst10g01369 175 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 24 158 - -
Arst10g01369 175 CDD RING-H2_EL5-like 107 150 - -
Arst10g01369 175 ProSiteProfiles Zinc finger RING-type profile. 108 150 IPR001841 -
Arst10g01369 175 SMART ring_2 108 149 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01369 Arst-Chr10 20879235 20880538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g01369 12 158 C3H Transcription Factor Family AT3G11110 41.722 1.86e-33 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01369 - - aip:107623622 360.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g01369 10 20879235 20880538 Arst7g01100 7 9116050 9116682 PCT