Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01368 ATGGGATTGATAGTTGAGGTTGATACCGTAGAAGAGGACGCCGCCGTTTTGGTCCCGCCGCCGAACTTCTCAATGGTGGAGGACTGCATTTTCCGATCCAGTTTTCCCACTCCTTCCAATTTCCCTTTTCTCCAAACCCTAAACCTTCGATCCATCATATACTTGTGTCCAGAGCCCTATCCAGAAGAAAATCTGGAGTTTCTTCGATCGCAGAACATTCGGCTCTTTCAATTTGGAATTGAGGGGAAGACGGAGGCTTCTTTACCTATTCTGAGGGATTCAATTATGGAGGCTCTAAAAGTTTTAATTGATGTGAGAAATCACCCAGTTTTGATTCATTGCAAACGAGGAAAGCATAGAACAGGTTGCCTTGTCGGCTGTTTGAGAAAATTGCAGAATTGGTGCCTATCTTCTGTGTTTGAGGAGTACCAACGATTTGCTGGTGCTAAATCGAGGAATGGAGATTTAATCTTTATAGATAGGTTTGACATTGTAAGTCTGAAGCAGTGCCTTTACAGTATCATCTACCAGTATCAAGGATATGGTTCGAAGAAGAGACGATTGCTGTATACAGACCAGAACTTGCAGAAACACCAACTGGCATCCTTTTAG 612 0.4314 MGLIVEVDTVEEDAAVLVPPPNFSMVEDCIFRSSFPTPSNFPFLQTLNLRSIIYLCPEPYPEENLEFLRSQNIRLFQFGIEGKTEASLPILRDSIMEALKVLIDVRNHPVLIHCKRGKHRTGCLVGCLRKLQNWCLSSVFEEYQRFAGAKSRNGDLIFIDRFDIVSLKQCLYSIIYQYQGYGSKKRRLLYTDQNLQKHQLASF 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01368 203 PANTHER TYROSINE-PROTEIN PHOSPHATASE 12 175 - -
Arst10g01368 203 FunFam probable tyrosine-protein phosphatase At1g05000 16 166 - -
Arst10g01368 203 CDD PFA-DSP_Siw14 17 163 - -
Arst10g01368 203 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 17 152 IPR029021 -
Arst10g01368 203 Gene3D Protein tyrosine phosphatase superfamily 16 166 IPR029021 -
Arst10g01368 203 ProSitePatterns Tyrosine specific protein phosphatases active site. 112 122 IPR016130 GO:0016311|GO:0016791
Arst10g01368 203 PRINTS Plant and fungal dual specificity phosphatase signature 90 104 IPR020428 GO:0016791
Arst10g01368 203 PRINTS Plant and fungal dual specificity phosphatase signature 54 67 IPR020428 GO:0016791
Arst10g01368 203 PRINTS Plant and fungal dual specificity phosphatase signature 73 87 IPR020428 GO:0016791
Arst10g01368 203 PRINTS Plant and fungal dual specificity phosphatase signature 17 34 IPR020428 GO:0016791
Arst10g01368 203 Pfam Tyrosine phosphatase family 17 167 IPR004861 -
Arst10g01368 203 ProSiteProfiles Dual specificity protein phosphatase domain profile. 22 177 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01368 Arst-Chr10 20826714 20827396 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g01368 1 196 Protein tyrosine phosphatase (PTP) family AT3G02800 68.367 9.80e-101 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01368 K18045 - gmx:100787713 345.51