Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01345 ATGAGCAAGAAGAACCGGAAATTCAGGGATCTTCATGGAGTTCTTAGCCTTCTAGCTTTGTGCTTGTTGTTTCAGAGCTTTGGTATATGCCACTCTTTGAACGAAGAAGGTAGAGCTCTATTGAAGTTGAAGGAAAGGATTGTGAGTGACCCTTTTGGAGCTTTGTCAGATTGGGTTGATGATCAAGTATCTGTTGACCCTTGCATTTGGTTTGGTGTTGAGTGTTCCTCATATGGAAGAGTTGTGGTCTTGAATTTGAAAGATCTTTGTCTTGGAGGAACTCTGACGCCGGAGCTCGCAAACCTTGCTCATATAAAGTCCATTGTGTTGAGAAACAATTCTTTTTCCGGAATAGTTCCTGAATGTATTGTGCACTTGAAAGAATTGGAGGTTTTGGATTTGGGCTACAACAACTTCAGTGGACCTCTACCTGCAGATCTTGGGAGTAATATTTCGTTATCGATCCTTTTGCTGGATAACAATGATCTTCTTGGTGGGTTCTCTCCTGAAATTAACAAATTGAGTATGCTTTCAGAATCTCAAGTAGACGAAAAACAATTGATTAATTCTGATAAAATGCCGGCTTGTACAGAAAGATACGCCTCATGGCATGTTGGCCAAAACAGTTTACGGAGGCTACTGCAATCTCGTGAGCATGGCGATATTCATAATCGTGCAGCAGCTAATCCTCTTAGCCCTGGTCCATCCCCTCAGCCAGATCCTTCTTTAGCTTCCCCTCGGCCGAGTCCTGCTTCTGCTCCTTCTCCCTCACAGTCAAGTCCTCCTTTTGCTTCTCCATCTCCATCGGAAAAACCACAACCACGGCTAAAGCCTGTTTCTCGCAATAGAAACAATTCTGTTGCTCCTCCTACTGCTTCACCACATGGAAATAATTCTGCTTCCCCTCCTACCGGTTCAACTTCAGGCTCTAAGACACAACCTGAAACCAAATCATCAAAGAGTCATCTAGCTGTTATCTTGGCCGGAGTTCTGGGTGGTGCTGCGTTTCTTATTGTTTCAAGCATTGGGATATATCTCTGTAAAACGAACAAGGTAGCTACTGTAAAACCTTGGGCGACAGGATTAAGTGGACAGCTTCAAAAGGCATTTGTGACAGGTGTGCCAAAGTTAAAGAGATCCGAGCTTGAGGCAGCATGTGAAGATTTCAGTAATGTAATCGGCACTTCGCCCATTGGTACAATTTACAAAGGGACTTTATCTAGTGGTGTTGAAATAGCTGTAGCATCTATTACAAAGGAAGACTCCAAGAATTGGTCAAAGACTTCAGAAACGCAATTTCGGAAGAAGATTGATACACTATCGAAAATGAACCACAAGAATTTCGTAAATCTTATTGGATTTTGTGAAGAAGAGGAACCCTTCACCAGAATGGTGGTCTTCGAATATGCCCCGAATGGAACACTATTTGAGCATTTACACATAAAAGAAGCCGAGCATTTGGAGTGGGGAACAAGACTTCGAGTCGCAATGGGAATGGCTTACTGCTTGCAACATATGCACCAGTTGGACCCTCCAATGGCCCATAGCAACCTTGACTCTCAAGCTATCCACCTCACCGACGATTATGCTGCCAAAGTATCAGATTTCAGTTACCTGAATGAAATAGTTCCGGGCGACACAAAAGCCGGTGCTAGAAAACACACCACTGACACTACATTAACAAGTAATGTTCACAGTTTTGGAGTCATATTACTTGAAATAGTAACCGGCCGGCTTCCTTCCTCGGCAGATAGTGGCTTTCTTGGAGACTGGATGTTGCCCTTCTTACAAGGCAACCGCCGGTCGCTCAGCGAAATCATTGATCCGACACTATCGTCTTTCCAAGAAGAACAGCTCCAGGGAATCACTGCTTTGATAAAGTCTTGCATGGATCGCGATCCACAGCGAAGACCAACAATGAAAGAGGTGAGTGAGAGATTGAGAGAGATAACGAAGATTACGCCGGAACAGGCCGTTCCGAAGCTTTCACCACTTTGGTGGGCAGAGCTTGAGATTTCTTCTTTGGATGCAAGCTGA 2037 0.4413 MSKKNRKFRDLHGVLSLLALCLLFQSFGICHSLNEEGRALLKLKERIVSDPFGALSDWVDDQVSVDPCIWFGVECSSYGRVVVLNLKDLCLGGTLTPELANLAHIKSIVLRNNSFSGIVPECIVHLKELEVLDLGYNNFSGPLPADLGSNISLSILLLDNNDLLGGFSPEINKLSMLSESQVDEKQLINSDKMPACTERYASWHVGQNSLRRLLQSREHGDIHNRAAANPLSPGPSPQPDPSLASPRPSPASAPSPSQSSPPFASPSPSEKPQPRLKPVSRNRNNSVAPPTASPHGNNSASPPTGSTSGSKTQPETKSSKSHLAVILAGVLGGAAFLIVSSIGIYLCKTNKVATVKPWATGLSGQLQKAFVTGVPKLKRSELEAACEDFSNVIGTSPIGTIYKGTLSSGVEIAVASITKEDSKNWSKTSETQFRKKIDTLSKMNHKNFVNLIGFCEEEEPFTRMVVFEYAPNGTLFEHLHIKEAEHLEWGTRLRVAMGMAYCLQHMHQLDPPMAHSNLDSQAIHLTDDYAAKVSDFSYLNEIVPGDTKAGARKHTTDTTLTSNVHSFGVILLEIVTGRLPSSADSGFLGDWMLPFLQGNRRSLSEIIDPTLSSFQEEQLQGITALIKSCMDRDPQRRPTMKEVSERLREITKITPEQAVPKLSPLWWAELEISSLDAS 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01345 678 Pfam Leucine rich repeat 104 163 IPR001611 GO:0005515
Arst10g01345 678 Pfam Protein tyrosine and serine/threonine kinase 390 647 IPR001245 GO:0004672|GO:0006468
Arst10g01345 678 Pfam Leucine rich repeat N-terminal domain 34 76 IPR013210 -
Arst10g01345 678 SUPERFAMILY Protein kinase-like (PK-like) 370 647 IPR011009 -
Arst10g01345 678 MobiDBLite consensus disorder prediction 225 317 - -
Arst10g01345 678 Gene3D Transferase(Phosphotransferase) domain 1 470 659 - -
Arst10g01345 678 MobiDBLite consensus disorder prediction 278 317 - -
Arst10g01345 678 SUPERFAMILY L domain-like 36 178 - -
Arst10g01345 678 Gene3D Ribonuclease Inhibitor 32 208 IPR032675 -
Arst10g01345 678 Gene3D Phosphorylase Kinase; domain 1 359 469 - -
Arst10g01345 678 PANTHER PROTEIN MALE DISCOVERER 2 16 674 - -
Arst10g01345 678 MobiDBLite consensus disorder prediction 232 273 - -
Arst10g01345 678 FunFam Inactive receptor-like serine/threonine-protein kinase 361 469 - -
Arst10g01345 678 ProSiteProfiles Protein kinase domain profile. 387 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g01345 678 FunFam Nuclear pore complex protein NUP107 33 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01345 Arst-Chr10 19696504 19700186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g01345 14 650 Receptor kinase-like Gene Family AT1G25320 25.514 1.49e-41 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Arst10g01345 PK_Tyr_Ser-Thr 1.8e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01345 - - gmx:100784541 812.757