Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01319 ATGGGAAGTGGAAACTCGCCATGTGCTTCATGCAAGCTTCTTAGACGGAGGTGTGCCAAGGATTGCATCTTCGCACCTTATTTCCCTTCCGATGACCCTCAAAAGTTCGCCATTGTTCACAAGGTCTTTGGTGCTAGCAACGTTAGCAAAATGTTACAGGAGCTTCCGATTCATCAAAGAGCAGATGCAGTGAGTAGCTTGGTATACGAAGCGAACGCAAGGGTTCGTGACCCGGTGTATGGATGCGTGGGAGCCATATCATACCTTCAGAACCAAGTCTCAGAGCTTCAAATGCAGCTTGCTGTTGCGCAGGCAGAGATACTCTGCATCCAGATGCAGCATGAACCCTCTGTAGCCGCAGCAATACCCAATCCACAACAAATAATGGAGTTTCAAGAACAGAACAATAATAATAATGAACTCACTCACCATCACCATCACCATCATCAGTACCTTAACTTTGCAGCAGCTTCTTCTAGCAATGTAATCCATGATTCTCTCTCTAGAGAGACTTTCTTTGGACATGACATGGTTTCTTAA 540 0.4556 MGSGNSPCASCKLLRRRCAKDCIFAPYFPSDDPQKFAIVHKVFGASNVSKMLQELPIHQRADAVSSLVYEANARVRDPVYGCVGAISYLQNQVSELQMQLAVAQAEILCIQMQHEPSVAAAIPNPQQIMEFQEQNNNNNELTHHHHHHHQYLNFAAASSSNVIHDSLSRETFFGHDMVS 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01319 179 Coils Coil 86 106 - -
Arst10g01319 179 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 144 - -
Arst10g01319 179 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Arst10g01319 179 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01319 Arst-Chr10 18438212 18439228 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g01319 2 118 AS2 family AT2G30130 90.598 2.57e-77 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Arst10g01319 LOB 1.5e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01319 - - rcu:8272084 263.848