Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01275 ATGGTGAATGCAATGGAGTGGCCGAAGCAGCAACAGCAGAATCAGAATCAGCAGAGGAATGTGATTGCTGGAGAGATCATGTATGTGAAGGTGATGACCGATGAGCAGTTAGAGACTCTGAGGAAGCAGATCGCTGTATATGCCACCATTTGTGAGAAGCTAATTGAGATGCACAAAACCCTCTCTGCTCAGCAAGACCTTGCTGGGCTTGGAAGCATGTATTGTGATCCATTGATGGCCTCTTCTGGCCACAAAATAACTTCCCGGCAGCGGTGGACTCCGACATCTGTGCAGCTTCAGATTCTTGAGAGGATATTTGATCAGGGGACCGGAACTCCAAGCAAGGAGAAGATCAAGGAGATTACTGCTGAACTTAGTAAGCATGGTCAAATTTCTGAGACTAACGTCTACAACTGGTTTCAGAACCGACGTGCTAGATCGAAAAGAAAGCAGCAGAATGTGGCAGCTAGCAATAACACTAACACCAACACTGAATCAGAAGTAGAGACTGAGGTTGATTCCAAGGATAAGAAGACTAAACCAGAGGAGTTTCAGTCGCAGCAGAGTCTCGCTAATGTGGCTGCTCAGAATGTCTGCTTCCATAACCGTGACTTGCCTTACTTGAATCCGGAATCCAATAAATCAGATTCCATTTTCCCATCAGATGGTAGCCTAACATCTACAAGCAACTTTGATCATATGCCTGTTTTCAATGGGATGATAGCAAATTCAAGGAGTGATTACCTTGCTGGGAAAATGGAAGCACCTGATAGTTACAATATATACCATGAAGGAGGAGACTACAACATTACAGGTTGA 819 0.4469 MVNAMEWPKQQQQNQNQQRNVIAGEIMYVKVMTDEQLETLRKQIAVYATICEKLIEMHKTLSAQQDLAGLGSMYCDPLMASSGHKITSRQRWTPTSVQLQILERIFDQGTGTPSKEKIKEITAELSKHGQISETNVYNWFQNRRARSKRKQQNVAASNNTNTNTESEVETEVDSKDKKTKPEEFQSQQSLANVAAQNVCFHNRDLPYLNPESNKSDSIFPSDGSLTSTSNFDHMPVFNGMIANSRSDYLAGKMEAPDSYNIYHEGGDYNITG 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01275 272 Gene3D - 90 156 - -
Arst10g01275 272 ProSiteProfiles 'Homeobox' domain profile. 85 150 IPR001356 GO:0003677
Arst10g01275 272 PANTHER WUSCHEL-RELATED HOMEOBOX 13 5 268 IPR044559 GO:0003700
Arst10g01275 272 Pfam Homeodomain 89 149 IPR001356 GO:0003677
Arst10g01275 272 SMART HOX_1 87 154 IPR001356 GO:0003677
Arst10g01275 272 MobiDBLite consensus disorder prediction 168 183 - -
Arst10g01275 272 CDD homeodomain 89 151 IPR001356 GO:0003677
Arst10g01275 272 MobiDBLite consensus disorder prediction 147 188 - -
Arst10g01275 272 SUPERFAMILY Homeodomain-like 87 153 IPR009057 -
Arst10g01275 272 MobiDBLite consensus disorder prediction 151 167 - -
Arst10g01275 272 FunFam WUSCHEL-related homeobox 11 89 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01275 Arst-Chr10 17192793 17196730 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g01275 5 272 Wox Gene Family AT4G35550 49.301 1.10e-83 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Arst10g01275 Homeodomain 3.8e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01275 - - gmx:100784355 377.481