Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01248 ATGGTTTCTAGAGAGCAAAAGAGAGCAGCACTATTGCACGAGAAGCTGCAACTTCTTCGTTCCATTACTAACTCTCATGCTCTTAACAAGACGTCGATTATAATCGATGCATCAAAGTACATCAGAGATCTAAAGCAAAAAGTAGAAAGACTCAATCAAGACATGGCGGCTGCACAAACATCCACTCACCAAAATCCTTTGCCTATGGTAAAAGTAGAAACCCTAGAGAAGGGGTTTCTTGTAAACGTGGTGTCAGCAAAGAGTTGTCCAGGTCTTCTTGTTTCCATATTGGAGGTGTTTGAAGAGATGGGTCTCACTGTTATGGAAGCTAGGGTTTCTTGCACAGACACTTTTCGCTTTCAAGCTGTTGGAGGAGAAAATGAAGAGGATGGTGAGAGTATTATTGATGCACAAGCTGTGAAACTAGCAGTGGGGCAAGCAATCAAGAATTGGAGCCAACAAAGTACTGATGATGATGATGATAATGATGATGATCAACAGTGA 504 0.4167 MVSREQKRAALLHEKLQLLRSITNSHALNKTSIIIDASKYIRDLKQKVERLNQDMAAAQTSTHQNPLPMVKVETLEKGFLVNVVSAKSCPGLLVSILEVFEEMGLTVMEARVSCTDTFRFQAVGGENEEDGESIIDAQAVKLAVGQAIKNWSQQSTDDDDDNDDDQQ 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01248 167 Gene3D - 2 67 IPR036638 GO:0046983
Arst10g01248 167 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 151 - -
Arst10g01248 167 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 3 66 IPR036638 GO:0046983
Arst10g01248 167 Coils Coil 34 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01248 Arst-Chr10 16584878 16587195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g01248 5 144 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 28.289 1.49e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01248 - - adu:107469282 300.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g01248 10 16584878 16587195 Arst7g01048 7 8533290 8535077 ECH
Arst4g02732 4 99743573 99746936 Arst10g01248 10 16584878 16587195 ECH
Arst1g00704 1 6984498 6987639 Arst10g01248 10 16584878 16587195 ECH
Arst10g01248 10 16584878 16587195 Arst10g01248 10 16584878 16587195 ECH
Arst10g01248 10 16584878 16587195 Arst7g01048 7 8533290 8535077 PCT