Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01247 ATGGCTCTCTGGCTTCAAGGCGAAATTCCAACATTGGATGATTGTATTAGATGGTGGTCAGAGCAGATAGAGATTTTGAATCAACAAAAGGAGGATTTGGGTTTTCTTAGAGGCATTGTTACAGCCTTCAAAGAACAAATTCACACCGATATACTTGTTAGCCCAGGTGGCCATGGTCTTCCAATACCTGCACATAAGTCTGTATTGGCAACAAGATCAGAAATCTTTAAGAACATGCTTGAGTGTGATGAATGCAAAGCAGCACCCAATAACCAAACCATAACCATACCAGACCTGAACCATGAAGAGCTATCATCTCTACTAGAGTTCCTCTACAGCGGCACACTACCTGAAGAAACAATCGCAAAGGATGTCTACGCCTTATCGCGCGCCGCCGATAAGTACGCCATCCCACATTTGTTAAGGCACTGCGAGAGGTATTTGCTGAGTTCACTCGACACTTCCAATGCACTCCAGACGCTTGAGATCGCCGACGTGTGTTCCAGTCACAATTTGAAGGAGACAACGTTGGTTTTCTTAGTTAAGAACATTGAGCATGTTGTGTCATCGCCTAGGTTTGAAGCTTTTGTCCATAGGAATCCACACTTAACCGTGCAATTGGTTTCAAGGGCTTTTGCAAATGGTTCCAAATAA 654 0.4388 MALWLQGEIPTLDDCIRWWSEQIEILNQQKEDLGFLRGIVTAFKEQIHTDILVSPGGHGLPIPAHKSVLATRSEIFKNMLECDECKAAPNNQTITIPDLNHEELSSLLEFLYSGTLPEETIAKDVYALSRAADKYAIPHLLRHCERYLLSSLDTSNALQTLEIADVCSSHNLKETTLVFLVKNIEHVVSSPRFEAFVHRNPHLTVQLVSRAFANGSK 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01247 217 Pfam BTB/POZ domain 45 151 IPR000210 GO:0005515
Arst10g01247 217 ProSiteProfiles BTB domain profile. 49 120 IPR000210 GO:0005515
Arst10g01247 217 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED-RELATED 16 214 IPR044784 -
Arst10g01247 217 Gene3D Potassium Channel Kv1.1; Chain A 20 153 IPR011333 -
Arst10g01247 217 SMART BTB_4 49 152 IPR000210 GO:0005515
Arst10g01247 217 CDD BACK 153 193 - -
Arst10g01247 217 SUPERFAMILY POZ domain 35 151 IPR011333 -
Arst10g01247 217 Gene3D - 154 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01247 Arst-Chr10 16555370 16556919 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Arst10g01247 BTB 4.3e-20 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01247 K10523 - gmx:100777561 334.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g01247 10 16555370 16556919 Arst10g01247 10 16555370 16556919 ECH