Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01221 ATGAATTCACCATTGACGCAGTTCGTTTCTTCGAGAAGGATGGGCGTGTATGATCCTATCCAGCAGATCAATATGTGGGGAGATAGCCTCAAAAGTAATGTCAATTTAAGTGCATCCATTCCCTTAATTGATGAAGCCGACATTAAGTTTGATAGTCAGTCAGAGGATGCTTCTCATGGTATCCTGGGAACAAATATCAAATATGACCAAGAAGCAAGTAAACCTATTGATAAGATACAGAGACGACTTGCGCAAAATCGAGAGGCTGCTCGGAAGAGTCGTTTGCGGAAAAAGGCCTATGTGCAGCAATTAGAATCTAGTCGTTTGAAGTTGATGCAGCTAGAGCAAGAGCTTGAACGTGCGAGACAGCAGGGAATGTATGTAGCCGGTGGATTGGATACTAATCATCTAGGTTTTGCTGGACCTATTAATTCAGGAATCACAGCTTTCGAGATGGAGTATGGACACTGGGTTGAGAAGCAAAATAGTCAAATCTTAGAACTGAGAAACGCTTTAAATTCTCATATTGGTGACTTAGAGCTGAGGATACTTGTAGATGATATGATGAATCACTACACCGAAATCTTTCGTATGAAATCTGCTGCTGCAAAAGCAGACGTCTTCTATGTAATGTCCGGCATGTGGAAAACTACGGCCGAGAGATTTTTCTTATGGATTGGAGGCTTTCGCCCCTCTGAACTTCTAAAGGTTCTTCTTCCTTTGATTGAACCTTTGACGGAGCAACAACGATTGGATGTCTGCAACCTCGGACAATCATGTCAGCAAGCCGAAGACGCCCTTTCACAAGGTATGGAGAAACTACAGCAAACACTTGCTGATAGCATAGCTGCCGGACAACTGATGGCCCCCCCTTTTTTTTTAATTACTATGTCTTTTGTATTGGAAATTCAACCATGTGATTAGAGAAATTAACCATGCTTTTATGTACACCAGGCTGATCATCTTCGGAAGGAGACACTGCAGCAGATGTCTCGAATATTGACTATCCGTCAGGCAGCTCGATGCTTGCTTGCTTTGGGGGAATACTTCCAACGCCTGAGAGCTCTGAGCTCGCTTTGGTCGAATCGTCCTCGCGAACCAGCTTAG 1107 0.4363 MNSPLTQFVSSRRMGVYDPIQQINMWGDSLKSNVNLSASIPLIDEADIKFDSQSEDASHGILGTNIKYDQEASKPIDKIQRRLAQNREAARKSRLRKKAYVQQLESSRLKLMQLEQELERARQQGMYVAGGLDTNHLGFAGPINSGITAFEMEYGHWVEKQNSQILELRNALNSHIGDLELRILVDDMMNHYTEIFRMKSAAAKADVFYVMSGMWKTTAERFFLWIGGFRPSELLKVLLPLIEPLTEQQRLDVCNLGQSCQQAEDALSQGMEKLQQTLADSIAAGQLMAPPFFLITMSFVLEIQPCDXRNXPCFYVHQADHLRKETLQQMSRILTIRQAARCLLALGEYFQRLRALSSLWSNRPREPA 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01221 368 PANTHER TRANSCRIPTION FACTOR TGA9 1 366 - -
Arst10g01221 368 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 76 120 IPR004827 GO:0003700|GO:0006355
Arst10g01221 368 SUPERFAMILY Leucine zipper domain 78 120 IPR046347 GO:0003700|GO:0006355
Arst10g01221 368 Gene3D - 77 127 - -
Arst10g01221 368 Pfam bZIP transcription factor 78 112 IPR004827 GO:0003700|GO:0006355
Arst10g01221 368 CDD bZIP_HBP1b-like 78 130 - -
Arst10g01221 368 FunFam BZIP family transcription factor 77 126 - -
Arst10g01221 368 Pfam Seed dormancy control 165 239 IPR025422 GO:0006351|GO:0043565
Arst10g01221 368 SMART brlzneu 74 134 IPR004827 GO:0003700|GO:0006355
Arst10g01221 368 Coils Coil 97 124 - -
Arst10g01221 368 ProSiteProfiles DOG1 domain profile. 147 363 IPR025422 GO:0006351|GO:0043565
Arst10g01221 368 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 81 96 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01221 Arst-Chr10 15884950 15890176 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g01221 1 368 Calmodulin-binding Proteins AT5G65210 65.867 1.71e-171 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Arst10g01221 DOG1 5.6e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01221 K14431 - gmx:100793353 570.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g01221 10 15884950 15890176 Arst10g01221 10 15884950 15890176 ECH
Arst3g04142 3 115849908 115854045 Arst10g01221 10 15884950 15890176 PCT