Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01216 ATGGCAATTTTTTCTAAGCTCTTCCACAAGCTTTGTTACAAAATCATAATCCTATTGGCATTCCTTCTGACTGAAATAATCATCCTCATCAGGAAGCTAAAATCATCATCATATACAGGTCCAATCACAACAAAGAAGTACCTCAGATTCATCGAAGAGAAGAACCCAACAATTTGCTACAGCAAGAAGAGTAGTAAGTTATTGAAGCTGAAACCGCCACGGCACGTGGAGTGCACGCTATGCTTGTCGGAGTTCATGGAAGGGGAGAAGCTGAGGAGTCTGAAATGCCAACACACGTTTCACAGGGATTGCTTAGACACATGGCTCAAAGACTACTGCGCCACGTGTCCTTTGTGTAGGTTAAAAGTGGTGTCCGATGATGTTGTTTCCCAGCACCGTGAGCTTAGAAAGCAAGCTGATTCTAACGGTAACGGTGAACAGCTAACGTATTTTTTAGCCGTGTTACGTGGCGGTAACACTTTGCAAAGTTAG 492 0.435 MAIFSKLFHKLCYKIIILLAFLLTEIIILIRKLKSSSYTGPITTKKYLRFIEEKNPTICYSKKSSKLLKLKPPRHVECTLCLSEFMEGEKLRSLKCQHTFHRDCLDTWLKDYCATCPLCRLKVVSDDVVSQHRELRKQADSNGNGEQLTYFLAVLRGGNTLQS 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01216 163 SMART ring_2 78 119 IPR001841 -
Arst10g01216 163 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 39 125 IPR013083 -
Arst10g01216 163 PANTHER - 1 160 - -
Arst10g01216 163 ProSiteProfiles Zinc finger RING-type profile. 78 120 IPR001841 -
Arst10g01216 163 SUPERFAMILY RING/U-box 77 126 - -
Arst10g01216 163 Pfam Ring finger domain 77 120 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01216 Arst-Chr10 15502006 15502858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g01216 77 131 C3H Transcription Factor Family AT1G15100 52.727 1.64e-16 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01216 K16282 - gmx:102668078 178.718
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g04149 3 116006429 116007100 Arst10g01216 10 15502006 15502858 PCT