Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01175 ATGTTTTTAAGCTGTTCTTTTTCCTTGGGGTCTGTAGGGCATGAGAGTCATGGAGTTCATCTCTGTCACAAATGTGGATGGCCTTTCCCGAATCCACATCCAAGTGCCAAGCACAGGCGTGCTCACAAGAAGATCTGTGGAACCATTGAAGGTTACAAGCTATGTTCCTCCGAGGAACAATCTCGCTCAAACGGCTCAGATGATGGACATGGTTCTGATGATGATAAAAAATCCCCAGGTCCAGAGGTCTTGAATATAGGCAACAAGGAGAAGGATGATAGTGGAATTGGAGATAAAATAAATAGATCAGAAGATGAGGTGTTTTCAGATGCAGTTGCAGACTTTTCAGATAGTCAAGGAGTTAAGGAATCTCTGCAGGAAGGTAGTTTGGACTCAAGTACCAGTGTGGAATGGGACGGCAAAGATGATCCAAAATTTTCAGGGTCTTCCAAGGACAGTGATTTTAATGATTCCAAAGTGATCTCACAATTCAAAAGTTCAATTTTCATGTGCTCTAGGCATATGGAGGCTGTGGTGTGA 540 0.4296 MFLSCSFSLGSVGHESHGVHLCHKCGWPFPNPHPSAKHRRAHKKICGTIEGYKLCSSEEQSRSNGSDDGHGSDDDKKSPGPEVLNIGNKEKDDSGIGDKINRSEDEVFSDAVADFSDSQGVKESLQEGSLDSSTSVEWDGKDDPKFSGSSKDSDFNDSKVISQFKSSIFMCSRHMEAVV 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01175 179 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 12 154 - -
Arst10g01175 179 MobiDBLite consensus disorder prediction 63 109 - -
Arst10g01175 179 MobiDBLite consensus disorder prediction 57 157 - -
Arst10g01175 179 MobiDBLite consensus disorder prediction 136 152 - -
Arst10g01175 179 ProSitePatterns Zinc finger C2H2 type domain signature. 22 42 IPR013087 -
Arst10g01175 179 MobiDBLite consensus disorder prediction 119 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01175 Arst-Chr10 14374900 14377397 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Arst10g01175 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01175 - - adu:107469205 359.377