Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01171 ATGGAAACCAGCAGCACCCACAATGGGAGTAGCATGATGTGGTTTTTCAAGGATAGAGGGCTTGATGATAATAGCATACAAGGAATTTTCAGAAGGTGCAAACGCCTTGAGAGTGTTAACAAAGAGAGAGCAAATGAGAATTGGGAATACTTGAGAAGCATTGGAATTCAAGAAAGAAAGATTCCCTCTGTTGTTTCGAAATGCCCCAAGATCCTCGCTCTCAGCCTCAATGAGAAGATTGTCCCCATGGTTGAGTGTCTCAGGACATTAGGAACAAAGCCCCATGAAGTCACCTCTGCCATAGCCAAGTTCCCTCACATACTCTCACACAGTGTCGAAGAGAAACTTTGTCCCCTTTTGGCCTTCTTTCAGGCGTTAGGCATACCCGAGAAGCAACTAGGGAAGGTGATACTGCTCAATCCTCGGCTTATCAGCTACAGCATCGAAACAAAGCTGAAGGAGATTGTGGACTTCCTTGCTAGCCTTGGTCTAAATAAAGATGGAATGATTGGAAAAGTCATAGTCAAGGACCCGTTTATAATGGGTTATAGTGTTGATAAGAGACTCCGACCAACTTCAGAGTTTCTGAGGTCAATAGGCTTGAGTGAGTTAGATCTTCAGGCGGTGGCTGTGAACTTCCCAGCAATCTTAAGTAGAGATGCGAAAAAGGTTTTGATGCCCAATTATGATTTCTTAAAGAAATGCGGATTTCAAGACAAACAAATAGCTGCTTTGGTTGTTGGTTTTCCTCCTATTCTGATCAAGAGCATACAGAACTCTTTAGAGCCCAGGATTGGATTTTTAGTGGACGTGATGGGGAGACAAGTGGATGAAGTCGTTGATTATCCCTGCTTCTTTCGTCATGGCCTGAAGAGAAGGTTAGAGTTGCGGCACAAACTTTTAAAGCAGCAGAATCTAGATTGTAGCTTGAGTGAAATGCTGGACTGTAATCAGAAGAAGTTCCACATGAAGTTTGGCTTGTTAAAATTGAGTAACTAG 999 0.4304 METSSTHNGSSMMWFFKDRGLDDNSIQGIFRRCKRLESVNKERANENWEYLRSIGIQERKIPSVVSKCPKILALSLNEKIVPMVECLRTLGTKPHEVTSAIAKFPHILSHSVEEKLCPLLAFFQALGIPEKQLGKVILLNPRLISYSIETKLKEIVDFLASLGLNKDGMIGKVIVKDPFIMGYSVDKRLRPTSEFLRSIGLSELDLQAVAVNFPAILSRDAKKVLMPNYDFLKKCGFQDKQIAALVVGFPPILIKSIQNSLEPRIGFLVDVMGRQVDEVVDYPCFFRHGLKRRLELRHKLLKQQNLDCSLSEMLDCNQKKFHMKFGLLKLSN 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01171 332 FunFam transcription termination factor MTERF6, chloroplastic/mitochondrial 97 329 - -
Arst10g01171 332 Gene3D Transcription termination factor 3, mitochondrial 96 331 IPR038538 -
Arst10g01171 332 PANTHER CGI-12 PROTEIN-RELATED 132 253 IPR003690 GO:0003690|GO:0006355
Arst10g01171 332 SMART mt_12 171 202 IPR003690 GO:0003690|GO:0006355
Arst10g01171 332 SMART mt_12 62 93 IPR003690 GO:0003690|GO:0006355
Arst10g01171 332 SMART mt_12 98 129 IPR003690 GO:0003690|GO:0006355
Arst10g01171 332 SMART mt_12 27 57 IPR003690 GO:0003690|GO:0006355
Arst10g01171 332 SMART mt_12 243 275 IPR003690 GO:0003690|GO:0006355
Arst10g01171 332 SMART mt_12 207 238 IPR003690 GO:0003690|GO:0006355
Arst10g01171 332 SMART mt_12 134 165 IPR003690 GO:0003690|GO:0006355
Arst10g01171 332 SMART mt_12 276 307 IPR003690 GO:0003690|GO:0006355
Arst10g01171 332 Pfam mTERF 14 124 IPR003690 GO:0003690|GO:0006355
Arst10g01171 332 Pfam mTERF 104 321 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01171 Arst-Chr10 14275557 14279239 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Arst10g01171 mTERF 2.4e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01171 K15031 - gmx:100816929 551.206