Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01163 ATGAAATATAAGGTTCGTCTTGTGGCGAAAGGTAATCATCAAATGGAAGGTATCAGTTTTGATCAAGTTTTTGCACCAGTGATCAAGCTTCCTACAATTCGAATTATTTTAACCATTGTTCTATTTTATAAATGGCAAATTAAACAACTAGATTTTAACAATGCATTTCTTAATGGTGACTTAACTGAGCTTGTTTACATGAAGCAACCCCCTAGTTTTCAACAAGGTGATAATCTACAGGTTTGTCAATTACATAAATCACTCTATGGTTTAAAGCAAGCACCTAAATCTTGGTTTCTCAAGCTTGCTGCCACTTTGGCCAAATTTGGGTTCACTAAGACACGGTCTAATCATTGTCTATTTATGAAACACTCAGGTGATCTTAAACTTTACATATTAGTCTATGTTGATGATATATTGATAACTGGAAATGACTCTCAGGATATTCAAAGTATTTGGTGGGGTGAGATGGAGAGTGATTCGGAAGATAGCTCAGAGTTCTCTGGGCAGTGGATTGACGGATGGAGCACAAGATCGGAGGATGACAAATGTGAGAGAATAGGGACAGAGTCAAGACAACCAGAGAAAGTCAATATGACATCATTGGATACTGAAAAAACTAGTAGGGTAGCAGATGATGCGAAAGCACAGGAATCTAGTCCGTCGATGGTGAGGTCAAATGAAGAACCTAATAGTTCTAATCGCTTCGTGGCAGGGGTAACTGTGGAAGATCTGGCACTTGCTGAATTCGATTCAGTTGAGGAGGCACATGCAAGGTATATGGAATATGCACGAGTTACCGGGTTTGCGATTCGAAAGGGAGATTCGGAAAAAGATAAAGAAGGTAATATTGTGAGGAAATTTTTCTTCTGCAATAGAGAAGGATTGCGTGATAAGAAACATTTTGAGAGGATTGATAGACAGCGTGCACACAAACCAATTACACGAACCAATTGTAATGCGAAGTTTGTGGTTCATCTAGCCAAGGGGTGCGGTAAGTGA 1002 0.3912 MKYKVRLVAKGNHQMEGISFDQVFAPVIKLPTIRIILTIVLFYKWQIKQLDFNNAFLNGDLTELVYMKQPPSFQQGDNLQVCQLHKSLYGLKQAPKSWFLKLAATLAKFGFTKTRSNHCLFMKHSGDLKLYILVYVDDILITGNDSQDIQSIWWGEMESDSEDSSEFSGQWIDGWSTRSEDDKCERIGTESRQPEKVNMTSLDTEKTSRVADDAKAQESSPSMVRSNEEPNSSNRFVAGVTVEDLALAEFDSVEEAHARYMEYARVTGFAIRKGDSEKDKEGNIVRKFFFCNREGLRDKKHFERIDRQRAHKPITRTNCNAKFVVHLAKGCGK 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01163 333 Pfam FAR1 DNA-binding domain 260 328 IPR004330 -
Arst10g01163 333 Pfam Reverse transcriptase (RNA-dependent DNA polymerase) 2 151 IPR013103 -
Arst10g01163 333 MobiDBLite consensus disorder prediction 176 192 - -
Arst10g01163 333 SUPERFAMILY DNA/RNA polymerases 30 150 IPR043502 -
Arst10g01163 333 PANTHER GAG-POL-RELATED RETROTRANSPOSON 2 196 - -
Arst10g01163 333 MobiDBLite consensus disorder prediction 174 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01163 Arst-Chr10 14024855 14043268 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g01163 2 145 Receptor kinase-like Gene Family AT4G23160 52.349 2.66e-44 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Arst10g01163 RVT_2 4.1e-47 CL0027
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01163 - - adu:107469175 661.759