Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01145 ATGAAAGCACTTGAGCCTTTTATTATGACAAGTGATTATTTTTCATCTAATTCTAATAATAGCAATAGTAACGATAATAATTCCTTACCCTCTTTTTCTCTCTCACCTTCTTCCCCTGCATCATCATCATCATCACTATACCCTTCTTATTACAATTCCTTCACTTCTAATTACAACCCTTCACCGTTAAATTCTACCACCCAAAGTTCCTCCATAAGACTCAACCAACTCACGCCATCTCAAATTCTCCAAATCCAATCACAAATCCATGTTGCACAACAACAAGAAAAGAATCAACATGCTTTGTTTCTAGGGCCAAAACCTGCCCCCATGAAGCATGCCGGCGTGACGAATTCCTCTGCGGCCGCGAAGCCTACAAAGCTCTACCGAGGGGTGAGGCAAAGGCATTGGGGAAAATGGGTGGCAGAGATAAGGCTACCAAAGAACCGAACCCGTCTTTGGCTTGGAACATTCGAAACGGCTGAAGAAGCAGCGTTGGCTTATGACAACGCTGCTTTTAAGTTAAGAGGAGAACTTGCACGGCTTAATTTCCCTCACCTTCGCCACCACGGGGCACGCGTGTACGGTGAATTCGGGGAAATCAAGCCATTACCCTCTTCGGTGGACGCGAAACTCCAAGCCATTTGTGAAGGCTTGGAGAAAACAGAGAAGGTTGTAGTGGATACAAAGCCTAAGATAGAGGAAAATGCAACTGAATCCGACGTTGGATTTGGTTGTGCTGAGTTTGAGGATTATAAGTTGGAGAAGAAGCCAAAGTTGTCTCCTCCTTTGTTGTCTGATGAATCATCCGCTGCGGGCGGTGTGTCTTCGCCGGAATCCGATATCACTTTCTTGGATTTCTCGGATCCAGATGAAATTGATAACCTTGGGTTGGATTTGAAGAAGTATCCTTCAGTGGAGATTGATTGGGAGTCTATATGA 942 0.4459 MKALEPFIMTSDYFSSNSNNSNSNDNNSLPSFSLSPSSPASSSSSLYPSYYNSFTSNYNPSPLNSTTQSSSIRLNQLTPSQILQIQSQIHVAQQQEKNQHALFLGPKPAPMKHAGVTNSSAAAKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFETAEEAALAYDNAAFKLRGELARLNFPHLRHHGARVYGEFGEIKPLPSSVDAKLQAICEGLEKTEKVVVDTKPKIEENATESDVGFGCAEFEDYKLEKKPKLSPPLLSDESSAAGGVSSPESDITFLDFSDPDEIDNLGLDLKKYPSVEIDWESI 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01145 313 ProSiteProfiles AP2/ERF domain profile. 128 185 IPR001471 GO:0003700|GO:0006355
Arst10g01145 313 Gene3D AP2/ERF domain 128 186 IPR036955 GO:0003700|GO:0006355
Arst10g01145 313 CDD AP2 127 187 IPR001471 GO:0003700|GO:0006355
Arst10g01145 313 MobiDBLite consensus disorder prediction 259 286 - -
Arst10g01145 313 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 1 313 - -
Arst10g01145 313 MobiDBLite consensus disorder prediction 16 35 - -
Arst10g01145 313 PRINTS Ethylene responsive element binding protein signature 129 140 IPR001471 GO:0003700|GO:0006355
Arst10g01145 313 PRINTS Ethylene responsive element binding protein signature 151 167 IPR001471 GO:0003700|GO:0006355
Arst10g01145 313 SMART rav1_2 128 191 IPR001471 GO:0003700|GO:0006355
Arst10g01145 313 Pfam AP2 domain 129 178 IPR001471 GO:0003700|GO:0006355
Arst10g01145 313 SUPERFAMILY DNA-binding domain 128 186 IPR016177 GO:0003677
Arst10g01145 313 FunFam Ethylene-responsive transcription factor 2 127 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01145 Arst-Chr10 13323511 13325185 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g01145 1 313 AP2-EREBP Transcription Factor Family AT1G78080 48.485 1.82e-77 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Arst10g01145 AP2 1.5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01145 K09286 - gmx:100815162 286.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g01145 10 13323511 13325185 Arst10g01145 10 13323511 13325185 ECH