Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Arst10g01111 | ATGTCCGCTCCCATAAATCAGTCTGAGGATCCGAATTCTCCGGATCCGAATTGGAATTCGGATCCACAACTTCCGCTCCGTAACCTCGAACAGATCCGAACCCGACTCGATTCCCTCCATCGCTTTTTATCGGAATCCATCACCTCCAACAACCCTCTCTCCGGCGACCAATCCGCCGCCGTCTCCGATCAAATCGCCTCCGTCATCCACCAAAGCATCGCCCACGCCTCCGCCCTCGTCTCCTACTCTAAAACCTTCCACCCGCCGGGTTCCACTCCCGCCGCCGCGCCGCCGTTACCTAGGGTTGACCTATCAGCCAGTGTCGAGAAACTCAAACGCGCGTCGGATCTGAAAATCGAGCCGCCGGACGAGGACACCGCAACCGATGAGTTTGCCGATAGCGACGAGATCGTGGAGCTCGACGCCGTGGAGATCCTCGCGGAGCACCTTCACTTCTGCGAGATCTGCGGGAAAGGGTTCCGGCGAGACGCGAATCTGCGCATGCATATGCGCGCTCACGGGAACCAGTTCAAGACACCGGAGGCACTCGCGAAGCCGGAGAATCCGTCGTCCGCCGCCGTGCGCAGCCGGTTCTCGTGCCCGTTCGAGGGATGCAACAGGAACAAGAACCACCAGCGCTTCAGGCCGCTGAAATCGATGGTGTGTGTGAAGAATCACTTCAAGAGAAGCCACTGCCCGAAGATGTATTCGTGCACGCGGTGCCATAAGAAGAGCTTTTCGGTGCTCTCTGATCTGAAGAGCCACATGAAGAATTGCGGAGAGTCGAAGTGGAAGTGCTCTTGTGGGACCACGTTCTCAAGAAAGGATAAACTTTTTGGGCACATTGCTTTGTTTGAAGGGCATGTACCCTTGCTTGAAGACGATAATAAGGGCAAGCATGTGCAGGAAGATGATGATAGTGATCATTTTAGTGATTTGCCTGATGGCTTTTTTGATGATTTGGGTGATTTGAGCTCTTTAGGGTTTCCCTTAATTTAA | 999 | 0.5445 | MSAPINQSEDPNSPDPNWNSDPQLPLRNLEQIRTRLDSLHRFLSESITSNNPLSGDQSAAVSDQIASVIHQSIAHASALVSYSKTFHPPGSTPAAAPPLPRVDLSASVEKLKRASDLKIEPPDEDTATDEFADSDEIVELDAVEILAEHLHFCEICGKGFRRDANLRMHMRAHGNQFKTPEALAKPENPSSAAVRSRFSCPFEGCNRNKNHQRFRPLKSMVCVKNHFKRSHCPKMYSCTRCHKKSFSVLSDLKSHMKNCGESKWKCSCGTTFSRKDKLFGHIALFEGHVPLLEDDNKGKHVQEDDDSDHFSDLPDGFFDDLGDLSSLGFPLI | 332 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Arst10g01111 | 332 | Gene3D | Classic Zinc Finger | 234 | 284 | - | - | |
Arst10g01111 | 332 | Gene3D | Classic Zinc Finger | 151 | 174 | - | - | |
Arst10g01111 | 332 | PANTHER | PROTEIN SENSITIVE TO PROTON RHIZOTOXICITY 1 | 120 | 302 | IPR044300 | GO:0010044|GO:0010447 | |
Arst10g01111 | 332 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Arst10g01111 | 332 | Pfam | Zinc finger, C2H2 type | 152 | 173 | IPR013087 | - | |
Arst10g01111 | 332 | SMART | c2h2final6 | 236 | 257 | IPR013087 | - | |
Arst10g01111 | 332 | SMART | c2h2final6 | 198 | 231 | IPR013087 | - | |
Arst10g01111 | 332 | SMART | c2h2final6 | 151 | 173 | IPR013087 | - | |
Arst10g01111 | 332 | FunFam | Zinc finger 45-like | 148 | 174 | - | - | |
Arst10g01111 | 332 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 151 | 178 | IPR013087 | - | |
Arst10g01111 | 332 | SUPERFAMILY | beta-beta-alpha zinc fingers | 148 | 174 | IPR036236 | - | |
Arst10g01111 | 332 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 153 | 173 | IPR013087 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Arst10g01111 | Arst-Chr10 | 12316655 | 12318057 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Arst10g01111 | 134 | 292 | C2H2 Transcription Factor Family | AT1G34370 | 63.190 | 3.75e-76 | 234 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Arst10g01111 | zf-C2H2 | 0.00022 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Arst10g01111 | - | - | cam:101491258 | 384.415 |