Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01111 ATGTCCGCTCCCATAAATCAGTCTGAGGATCCGAATTCTCCGGATCCGAATTGGAATTCGGATCCACAACTTCCGCTCCGTAACCTCGAACAGATCCGAACCCGACTCGATTCCCTCCATCGCTTTTTATCGGAATCCATCACCTCCAACAACCCTCTCTCCGGCGACCAATCCGCCGCCGTCTCCGATCAAATCGCCTCCGTCATCCACCAAAGCATCGCCCACGCCTCCGCCCTCGTCTCCTACTCTAAAACCTTCCACCCGCCGGGTTCCACTCCCGCCGCCGCGCCGCCGTTACCTAGGGTTGACCTATCAGCCAGTGTCGAGAAACTCAAACGCGCGTCGGATCTGAAAATCGAGCCGCCGGACGAGGACACCGCAACCGATGAGTTTGCCGATAGCGACGAGATCGTGGAGCTCGACGCCGTGGAGATCCTCGCGGAGCACCTTCACTTCTGCGAGATCTGCGGGAAAGGGTTCCGGCGAGACGCGAATCTGCGCATGCATATGCGCGCTCACGGGAACCAGTTCAAGACACCGGAGGCACTCGCGAAGCCGGAGAATCCGTCGTCCGCCGCCGTGCGCAGCCGGTTCTCGTGCCCGTTCGAGGGATGCAACAGGAACAAGAACCACCAGCGCTTCAGGCCGCTGAAATCGATGGTGTGTGTGAAGAATCACTTCAAGAGAAGCCACTGCCCGAAGATGTATTCGTGCACGCGGTGCCATAAGAAGAGCTTTTCGGTGCTCTCTGATCTGAAGAGCCACATGAAGAATTGCGGAGAGTCGAAGTGGAAGTGCTCTTGTGGGACCACGTTCTCAAGAAAGGATAAACTTTTTGGGCACATTGCTTTGTTTGAAGGGCATGTACCCTTGCTTGAAGACGATAATAAGGGCAAGCATGTGCAGGAAGATGATGATAGTGATCATTTTAGTGATTTGCCTGATGGCTTTTTTGATGATTTGGGTGATTTGAGCTCTTTAGGGTTTCCCTTAATTTAA 999 0.5445 MSAPINQSEDPNSPDPNWNSDPQLPLRNLEQIRTRLDSLHRFLSESITSNNPLSGDQSAAVSDQIASVIHQSIAHASALVSYSKTFHPPGSTPAAAPPLPRVDLSASVEKLKRASDLKIEPPDEDTATDEFADSDEIVELDAVEILAEHLHFCEICGKGFRRDANLRMHMRAHGNQFKTPEALAKPENPSSAAVRSRFSCPFEGCNRNKNHQRFRPLKSMVCVKNHFKRSHCPKMYSCTRCHKKSFSVLSDLKSHMKNCGESKWKCSCGTTFSRKDKLFGHIALFEGHVPLLEDDNKGKHVQEDDDSDHFSDLPDGFFDDLGDLSSLGFPLI 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01111 332 Gene3D Classic Zinc Finger 234 284 - -
Arst10g01111 332 Gene3D Classic Zinc Finger 151 174 - -
Arst10g01111 332 PANTHER PROTEIN SENSITIVE TO PROTON RHIZOTOXICITY 1 120 302 IPR044300 GO:0010044|GO:0010447
Arst10g01111 332 MobiDBLite consensus disorder prediction 1 26 - -
Arst10g01111 332 Pfam Zinc finger, C2H2 type 152 173 IPR013087 -
Arst10g01111 332 SMART c2h2final6 236 257 IPR013087 -
Arst10g01111 332 SMART c2h2final6 198 231 IPR013087 -
Arst10g01111 332 SMART c2h2final6 151 173 IPR013087 -
Arst10g01111 332 FunFam Zinc finger 45-like 148 174 - -
Arst10g01111 332 ProSiteProfiles Zinc finger C2H2 type domain profile. 151 178 IPR013087 -
Arst10g01111 332 SUPERFAMILY beta-beta-alpha zinc fingers 148 174 IPR036236 -
Arst10g01111 332 ProSitePatterns Zinc finger C2H2 type domain signature. 153 173 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01111 Arst-Chr10 12316655 12318057 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g01111 134 292 C2H2 Transcription Factor Family AT1G34370 63.190 3.75e-76 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Arst10g01111 zf-C2H2 0.00022 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01111 - - cam:101491258 384.415