Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01106 ATGATACAAGTAGAAATGGATTTCATAGTATTGTTTTTGCTATTGGCTACACTATGTTCTTCAGAGCTTGAAAATAATTCACAAGAGGAAGCCCTATATGCATTGAAGTTATCATTGAATGCTTCAAAAAATCAGCTTACTAACTGGAATAGAGACCAAGTCAGCCCGTGCACTTGGTCTAATGTTTACTGTGACCCAAGTGGCAATATTTATCAAGTTTCACTAGCATTTATGGGATTTACAGGATACTTGACACCAAGAATAGGAGCATTAAAAGGTCTTCAAACTCTTGTTCTAAATGGGAATGGCATCACTGGAGGTATACCAAAAGAATTAGGAAACCTTACAAGATTAGTCAGATTGGATCTGCAAAACAACAGATTAACCGGTGAAATACCCTCTTCCCTTGGTAACCTTAAAAAGCTTCAGTTCTTAACATTGAGTCAAAACAACCTCAACGGATCTATTCCTGAATCATTAGCCAATCTTCCAAGCCTGATCAATGTTCTTCTAGATTCAAATGATCTCAGTGGTCAGATTCCAGAAGGCTTATTCAATGTTTCTAAATACAATTTCACTGGAAATAAGTTGAACTGTGGCATGAATTATCGTAAACTTTGTGCCTATGATATTGCAGACCAAGGTTACTTGTTTGAAATATTTGCTGATCCTTTTCTATTTTTGAAGGCTATTTAGTATTTACCTCACCCACCCCTGCTACACACTGTATTCTGAAGAATAGTTTTAGGTTTAGTTGTTCTTATTTGTCTTGGTGGTCTACTGTTCTTCTGGCGCAAGAGCTACAAGCGTGATGTTTACGTAGATGTTGCAGGTGAAGTTGATGGGCGAATTGCATTTGGTCAGCTGAAAAGATTTGCTTGGAGAGAACTGCAAATAGCTACAGACAACTTTAGTGAGAGAAATGTTTTAGGACAGGGAGGCTTTGGGAAGGTTTATAAAGGTGTTCTACCCGATGGCACAAAAATTGCTGTTAAAAGGTTAACCGATTATGAAAGTCCTGGTGGAGATGCTGCTTTCCAGCGTGAAGTTGAGATGATAAGTGTAGCTGTCCATAGGAACTTGTTACGGCTGATTGGGTTCTGTACGACTCCAACGGAGCGCCTATTAGTCTATCCCTTCATGCAGAACCTAAGTGTTGCCTATCGTCTTCGAGAACTTAAACCTGGGGAGGCTGTTTTGGATTGGCCTACGAGAAAAAAAGTGGCTCTGGGAACAGCCCGAGGCCTAGAATATCTTCATGAGCAATGCAATCCTAAGATTATCCATCGGGATGTGAAGGCAGCTAATGTATTACTGGATGGAGACTTCGAGGCAGTTGTAGGAGACTTCGGTTTAGCAAAGTTAGTTGACGTTCGAAGGACTAATGTGACAACTCAAGTTCGTGGGACCATGGGCCACATAGCTCCTGAATACTTGTCCACTGGAAAATCTTCAGAAAAGACTGATGTCTTCGGATATGGAATAATGCTTCTAGAGCTTGTTACAGGTCAACGTGCAATTGACTTTTCACGTTTGGAAGAGGAAGACGATGTGCTGTTGCTTGACCATGTTAAGAAACTTGAACGGGAGAAAAGACTAGATGCTATTGTTGATCGCAACCTGAAACAAAATTACAAAATAGAAGAAGTTGAAATGATTGTTCAAGTTGCATTACTCTGCACACAAGCATCACCAGAGGACCGACCAGCAATGTCGGAGGTCGTGAGAATGTTGGACGGAGAAGGACTGGCCGAAAGGTGGGAGGAATGGCAACACGTAGAGGTCAACCGGAGGCAGGATTACGAGAGACTGCAAAGAAGATTGGGGTGGGGAGAAGATTCAATAAATAACCAAGATGCCATTGAGTTGTCTGGTGGAAGATGA 1884 0.4124 MIQVEMDFIVLFLLLATLCSSELENNSQEEALYALKLSLNASKNQLTNWNRDQVSPCTWSNVYCDPSGNIYQVSLAFMGFTGYLTPRIGALKGLQTLVLNGNGITGGIPKELGNLTRLVRLDLQNNRLTGEIPSSLGNLKKLQFLTLSQNNLNGSIPESLANLPSLINVLLDSNDLSGQIPEGLFNVSKYNFTGNKLNCGMNYRKLCAYDIADQGYLFEIFADPFLFLKAIXYLPHPPLLHTVFXRIVLGLVVLICLGGLLFFWRKSYKRDVYVDVAGEVDGRIAFGQLKRFAWRELQIATDNFSERNVLGQGGFGKVYKGVLPDGTKIAVKRLTDYESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLRELKPGEAVLDWPTRKKVALGTARGLEYLHEQCNPKIIHRDVKAANVLLDGDFEAVVGDFGLAKLVDVRRTNVTTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLKQNYKIEEVEMIVQVALLCTQASPEDRPAMSEVVRMLDGEGLAERWEEWQHVEVNRRQDYERLQRRLGWGEDSINNQDAIELSGGR 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01106 627 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 10 589 - -
Arst10g01106 627 FunFam Putative LRR receptor-like serine/threonine-protein kinase 25 209 - -
Arst10g01106 627 SUPERFAMILY Protein kinase-like (PK-like) 286 578 IPR011009 -
Arst10g01106 627 SUPERFAMILY L domain-like 26 198 - -
Arst10g01106 627 Gene3D Transferase(Phosphotransferase) domain 1 381 598 - -
Arst10g01106 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 427 439 IPR008271 GO:0004672|GO:0006468
Arst10g01106 627 Pfam Protein kinase domain 305 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g01106 627 Gene3D Ribonuclease Inhibitor 25 209 IPR032675 -
Arst10g01106 627 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Arst10g01106 627 SMART serkin_6 304 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g01106 627 Gene3D Phosphorylase Kinase; domain 1 273 380 - -
Arst10g01106 627 FunFam Somatic embryogenesis receptor kinase 1 273 380 - -
Arst10g01106 627 FunFam Somatic embryogenesis receptor-like kinase 1 381 598 - -
Arst10g01106 627 ProSitePatterns Protein kinases ATP-binding region signature. 310 332 IPR017441 GO:0005524
Arst10g01106 627 Pfam Leucine rich repeat 117 176 IPR001611 GO:0005515
Arst10g01106 627 ProSiteProfiles Protein kinase domain profile. 304 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01106 Arst-Chr10 12142699 12148918 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g01106 3 627 Receptor kinase-like Gene Family AT5G10290 70.111 0.0 851
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Arst10g01106 Pkinase 7.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01106 - - gmx:100793416 960.674