Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01103 ATGGCAATTACACATTTTGGTAGTACGTTTGCAACTCAATGGGGAATTCGTCCTCAGGTTTTCGCAAGATCCAGCATAGTAAGCAAGACTACGTCATCCAGCCACAATGTTACAAGCAGGGTGAGCTTTATAGCGGCCCCAGCTTCAAGCTTTTTCTCCCGGGATTCCTCACGTGCACTATTTAACATGAGTTCATCTCAGACATATCACCGAAGGGGTTCAAGGTTGATAGTTAGAGCAGAAACAGATTACTATTCCGTCCTTGGCGTGTCAAGAAATGCTAGTAAATCTGAAATTAAGAGTGCTTATCGGAAGCTTGCCCGGAATTATCATCCAGATGTGAACAAAGATCCTGGTGCAGAACAGAAATTTAAGGACATTAGCAATGCATATGAGGTCTTATCAGATGATGAGAAACGATCGATATATGATCAATATGGAGAGGCCGGGCTTAAAGGTTCAGGAATGGGCATGGGGGATTTCAGCAGTCCTTTTGATATATTTGAAACGCTTTTTGAGGGCATGGGTGGCATGGGTTCAAGAGGTGCTTGGAATGGAGCAATTGACGGTGAAGATGAATATTACAGTCTCGTTTTGAACTTCAAAGAAGCAGTTTTTGGAGTAGAAAAGGAGATAGAGATTAGGCGGTTAGATAGCTGTGGAACTTGCAATGGTTCAGGGGCTAAACCGGGGACCAAGTCATCCAGATGTAGCACTTGTGGCGGTCAAGGTCGTGTTGTCTCATCAACCAGGACCCCTCTAGGCATCTTTCAGCAGTCTATGACCTGCTCTTCCTGCAATGGAACCGGAGAAACATCAACACCATGCAGCACATGTTCTGGGGATGGTCGTGTGAGGAAAACAAAACGGATAAGTCTGAAGGTTCCCCCTGGTGTGGATTCTGGTAGCCGTTTAAGAGTCCGGAATGAAGGCAATGCTGGAAGACGTGGCGGTGCACCTGGTGACCTCTTTGTAGTTATCGAAGTTATCCCAGATCCTGTCCTCAAACGAGATGACACCAACATTCTGTACACCTCCAAGGTGTCTTATATTGATGCTATCTTGGGAACTACAATCAAGGTTCCTACTGTAGATGGCATGGTGGATTTAAAAGTCCCGGCTGGGACTCAACCCGGANNNNNNNAAGGTGTTCCGCTGCTGAATAAGAGTAACATGAGAGGTGATCAATTGGTTCGCGTGCAAGTCGAAATCCCCAAGAGACTGAGCAGTGATGAGAGAAAACTTATTGAGGAACTTGCTGATTTGAGCAAAGGAAAGAGTAAAGCTGCTGCTAGTGGTACTAGGAGATAA 1311 0.4531 MAITHFGSTFATQWGIRPQVFARSSIVSKTTSSSHNVTSRVSFIAAPASSFFSRDSSRALFNMSSSQTYHRRGSRLIVRAETDYYSVLGVSRNASKSEIKSAYRKLARNYHPDVNKDPGAEQKFKDISNAYEVLSDDEKRSIYDQYGEAGLKGSGMGMGDFSSPFDIFETLFEGMGGMGSRGAWNGAIDGEDEYYSLVLNFKEAVFGVEKEIEIRRLDSCGTCNGSGAKPGTKSSRCSTCGGQGRVVSSTRTPLGIFQQSMTCSSCNGTGETSTPCSTCSGDGRVRKTKRISLKVPPGVDSGSRLRVRNEGNAGRRGGAPGDLFVVIEVIPDPVLKRDDTNILYTSKVSYIDAILGTTIKVPTVDGMVDLKVPAGTQPGXXXXGVPLLNKSNMRGDQLVRVQVEIPKRLSSDERKLIEELADLSKGKSKAAASGTRR 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01103 437 Pfam DnaJ C terminal domain 195 406 IPR002939 -
Arst10g01103 437 SUPERFAMILY HSP40/DnaJ peptide-binding domain 188 343 IPR008971 GO:0006457|GO:0051082
Arst10g01103 437 Gene3D - 330 436 - -
Arst10g01103 437 Pfam DnaJ central domain 220 283 IPR001305 GO:0031072|GO:0051082
Arst10g01103 437 Hamap Chaperone protein DnaJ [dnaJ]. 80 429 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Arst10g01103 437 SUPERFAMILY HSP40/DnaJ peptide-binding domain 335 417 IPR008971 GO:0006457|GO:0051082
Arst10g01103 437 CDD DnaJ 83 136 IPR001623 -
Arst10g01103 437 FunFam Molecular chaperone DnaJ 212 288 - -
Arst10g01103 437 NCBIfam molecular chaperone DnaJ 83 422 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Arst10g01103 437 SMART dnaj_3 82 139 IPR001623 -
Arst10g01103 437 PRINTS DnaJ domain signature 139 158 IPR001623 -
Arst10g01103 437 PRINTS DnaJ domain signature 85 103 IPR001623 -
Arst10g01103 437 PRINTS DnaJ domain signature 103 118 IPR001623 -
Arst10g01103 437 PRINTS DnaJ domain signature 119 139 IPR001623 -
Arst10g01103 437 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 207 287 IPR036410 -
Arst10g01103 437 FunFam Putative Mitochondrial DnaJ chaperone 272 325 - -
Arst10g01103 437 ProSitePatterns Nt-dnaJ domain signature. 124 143 IPR018253 -
Arst10g01103 437 ProSiteProfiles dnaJ domain profile. 83 147 IPR001623 -
Arst10g01103 437 ProSiteProfiles Zinc finger CR-type profile. 207 288 IPR001305 GO:0031072|GO:0051082
Arst10g01103 437 Gene3D - 220 283 - -
Arst10g01103 437 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 45 429 - -
Arst10g01103 437 FunFam Chaperone protein dnaJ A6 chloroplastic 80 183 - -
Arst10g01103 437 FunFam Chaperone protein dnaJ 1, mitochondrial 330 433 - -
Arst10g01103 437 Pfam DnaJ domain 83 144 IPR001623 -
Arst10g01103 437 Gene3D - 190 325 - -
Arst10g01103 437 Gene3D DnaJ domain 80 183 IPR036869 -
Arst10g01103 437 CDD DnaJ_zf 220 283 IPR001305 GO:0031072|GO:0051082
Arst10g01103 437 CDD DnaJ_C 191 409 - -
Arst10g01103 437 MobiDBLite consensus disorder prediction 295 314 - -
Arst10g01103 437 SUPERFAMILY Chaperone J-domain 79 181 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01103 Arst-Chr10 12082126 12086678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g01103 84 146 C2H2 Transcription Factor Family AT1G74250 43.478 7.97e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01103 K03686 - gmx:100786143 698.738