Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01095 ATGGGCAACTTGGTCATTGCATACATTATTTTAGCCTTTTATTCTCTCTTCATTATTGTGCATGGCACTGATAAGTTATCATGCAATCAAACTCCATATCCCACTCTTTGTAACCATTACATTGGCACTACCAATTATTCAATTTCATCATCATCAAGTGATGATGTTTCCTTCCATGACATTGCCCTTAAGGTCACCATGGACCAAGCAATAGTAGCACACAAACTTGTCTCATCAACCATGGAATCCAACGATTTCAAAGACAAGAGAGCCAAGTCCGCATGGGAAGATTGTTTGGAACTCTATGAGAATACAATATATCAGCTGAACCGTTCAATGAGCTCAAACAATCTAAACGACAGGTTAACATGGCAAAGTGCTTCTATTGCGAATCAACAAACATGCCAAAACGGTTTTCTTGATTCTAACCTTTCATCTCACTACCTAAACTACTTTCCATCCATTTCAAGCAACTTATCCAAGTTGCTGAGCAACTCTTTGGCCATTAGCAATACATTAACGTCCTTGACTTCGTTACCAAAAGACCCGGTTGTTCGCGGCGGTCGAAAATTGCTTTCCTTTAATGGCTTCCCAGAGTGGCTATCTCCTTCCGACAGGAGGCTTCTTCAGGCTTTGCCGGGAACGGCGGCACCGAAGGCGGACATTGTGGTGGCACAGGACGGGAGTGGGAATTACAAGAGTGTTTCGGAGGGCGTGGCGGCGGCCGGTAGGCTGAGTAAGAATGGTCGAGTGGTTGTGTACGTGAAAGCTGGCGTTTACCGAGAGAGTGTGAACATAAAGGGAGGGATAAAGAATTTGATGATGTTTGGGGATGGTATTGGAGCTACCATTATTACGGGTAGCAAGAATTATCAAGACGGCTCCACCACTGTTGGTTCAGCTACTTTTACGGTGTGGTGTGATGGGTTCATCGCCAGGGACTTAACAATCGAGAACAGTGCTGGGCCACAGAAGCACCAAGCGGTGGCACTTCTTTCCAGCTCCGATCACTCCGTGTTCTACCGCTGTAGCTTCAGAGGCTACCAAGACACCTTATACGTCCTTTCCCAACGCCAATTCTACCGCGACTGCGACATCTACGGCACCATAGACTTCATCTTCGGTGACGCCGTCGCCCTCTTCCAAAACTGCAACATCTTCTTGAGAAAACCAATGAGTAAGCAACAGAACGCAGTGACAGCACAAGGGAGAACCGATCCCAATGAGAACACCGGCATTGTCATCCACAACTGCCGTATCATGGCGGCTTCAGATCTGAAGCCAGTTCAGGGATCTGTCAAGTGCTTCCTCGGCCGGCCGTGGCAGAAGTACTCAAGAACGGTAGTGGTCAAGAGTAGCCTGGACGGTTTGATTCAACCGGCAGGGTGGATGCCATGGGCGGGAAGCTTTGCCTTGAATACATTGTATTATGGAGAGTATATGAATATTGGAGCTGGTGCTAACACTGCAGGGAGGGTTAAATGGCCTGGCTTTCATGTTATTACCAACCCTACTGAGGCTTTGAAATTTACTGTTGCTAATTTCTTGGATGGTGGATCGTGGATTCCTGGGACTGGTGTTCCGTTTGAAACTGGCCTTTGA 1602 0.47 MGNLVIAYIILAFYSLFIIVHGTDKLSCNQTPYPTLCNHYIGTTNYSISSSSSDDVSFHDIALKVTMDQAIVAHKLVSSTMESNDFKDKRAKSAWEDCLELYENTIYQLNRSMSSNNLNDRLTWQSASIANQQTCQNGFLDSNLSSHYLNYFPSISSNLSKLLSNSLAISNTLTSLTSLPKDPVVRGGRKLLSFNGFPEWLSPSDRRLLQALPGTAAPKADIVVAQDGSGNYKSVSEGVAAAGRLSKNGRVVVYVKAGVYRESVNIKGGIKNLMMFGDGIGATIITGSKNYQDGSTTVGSATFTVWCDGFIARDLTIENSAGPQKHQAVALLSSSDHSVFYRCSFRGYQDTLYVLSQRQFYRDCDIYGTIDFIFGDAVALFQNCNIFLRKPMSKQQNAVTAQGRTDPNENTGIVIHNCRIMAASDLKPVQGSVKCFLGRPWQKYSRTVVVKSSLDGLIQPAGWMPWAGSFALNTLYYGEYMNIGAGANTAGRVKWPGFHVITNPTEALKFTVANFLDGGSWIPGTGVPFETGL 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01095 533 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 27 174 IPR035513 -
Arst10g01095 533 Pfam Pectinesterase 221 518 IPR000070 GO:0030599|GO:0042545
Arst10g01095 533 CDD PMEI-like_3 26 175 - -
Arst10g01095 533 Gene3D Invertase/pectin methylesterase inhibitor family protein 25 174 IPR035513 -
Arst10g01095 533 FunFam Pectinesterase 215 533 - -
Arst10g01095 533 SUPERFAMILY Pectin lyase-like 215 531 IPR011050 -
Arst10g01095 533 Pfam Plant invertase/pectin methylesterase inhibitor 27 169 IPR006501 GO:0004857
Arst10g01095 533 SMART PMEI_2 19 169 IPR006501 GO:0004857
Arst10g01095 533 ProSitePatterns Pectinesterase signature 2. 366 375 IPR033131 -
Arst10g01095 533 Gene3D - 215 533 IPR012334 -
Arst10g01095 533 PANTHER PECTINESTERASE 12 523 - -
Arst10g01095 533 NCBIfam pectinesterase inhibitor domain 27 174 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01095 Arst-Chr10 11902622 11905969 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g01095 27 533 Carbohydrate Esterase AT1G23200 53.774 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01095 - - lja:Lj4g3v3099630.1 730.709