Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01089 ATGGAAGAACGATATGAGATTATCAAAGATATTGGGTCTGGCAACTATGGCGTTGCAAAGCTTGTTAAGGATAAACGCAGCGGTGCTCTCTATGCTGTTAAGTTCATTCACAGAGGCCATAAGATTGATGAGCATGTGCAAAGAGAGATTATAAATCATAGGTCCTTAAAACATCCCAATATCATTAGATTTAAGGAGGTATTGTGTACTCCAACTCATCTAGCCATAGTGATGGAATATGCTGCCGGAGGAGAACTATTTGAAAGAATATGCAATGCTGGAAGATTCAGCGAGGACGAGGCGAGATATTTCTTCCAGCAATTGATTTCAGGAGTTAGCTATTGCCATTCAATGGAAATATGCCATAGGGATCTTAAGCTGGAAAACACACTTTTAGATGAGGGTTCAGCACCACGACTTAAAATATGCGACTTTGGTTACTCAAAGTCATCGGTTTTGCACTCGCAACCTAAATCTACGGTGGGAACGCCAGCTTATATTGCACCGGAAGTATTATCAAGAAGAGAATACGATGGAAAGGTTGCTGATGTTTGGTCCTGCGGAGTAACCTTATATGTGATGCTAGTGGGAGGTTATCCTTTTGAAGATTCGGATGATCCACGAAACTTCAAAGAAACTCTTAAGAGAATTCTCAATGCCCACTATTCTATTCCAAACTATGTTCGTGTCTCAAAGGATTGTGGGCACCTTCTATCTCAAATATTTGTAGCAAACCCAGAGAAGAGAATAACTATACCTGAAGTTAAAATGCACCCGTGGTACCTAAATAACTTGCCAGAGGAATTGATGGACCAAAGGGGATTCAAGTTGCAAAATATTGGTGCGGATGATGATGATTCATCATGTCAAAGCATTGAGTCAATACTTTCAATAATTCAAGAGGCTAGGAATTTAGGAGTGGGAAAAAAACTCAGTGGACAATTTGTTGCGGGTGACATTGATCTTGATGACATGGATGCTGAAATTGATGATATCGAAAATGGTGGCGATGATTTTGTATGTGCATTGTGA 1032 0.4002 MEERYEIIKDIGSGNYGVAKLVKDKRSGALYAVKFIHRGHKIDEHVQREIINHRSLKHPNIIRFKEVLCTPTHLAIVMEYAAGGELFERICNAGRFSEDEARYFFQQLISGVSYCHSMEICHRDLKLENTLLDEGSAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRREYDGKVADVWSCGVTLYVMLVGGYPFEDSDDPRNFKETLKRILNAHYSIPNYVRVSKDCGHLLSQIFVANPEKRITIPEVKMHPWYLNNLPEELMDQRGFKLQNIGADDDDSSCQSIESILSIIQEARNLGVGKKLSGQFVAGDIDLDDMDAEIDDIENGGDDFVCAL 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01089 343 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Arst10g01089 343 Pfam Protein kinase domain 5 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g01089 343 PANTHER SERINE/THREONINE KINASE 3 285 - -
Arst10g01089 343 ProSiteProfiles Protein kinase domain profile. 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g01089 343 Gene3D Transferase(Phosphotransferase) domain 1 81 268 - -
Arst10g01089 343 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Arst10g01089 343 FunFam Serine/threonine-protein kinase SRK2E 81 269 - -
Arst10g01089 343 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
Arst10g01089 343 SMART serkin_6 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g01089 343 SUPERFAMILY Protein kinase-like (PK-like) 3 280 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01089 Arst-Chr10 11578281 11615610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g01089 4 291 CBL-interacting serine-threonine protein kinases AT4G24400 41.077 2.41e-68 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Arst10g01089 Pkinase 7.6e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01089 K14498 - gmx:100807981 543.117