Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01057 ATGTCAACAAGAAGGAGTAACATAGGCGCGTGGGCCGCCGATGCTGAGCGAGCAGAGGAGGAGGAGCAGGAGGCTGCGGCCGCCGCGGCCATTGCCGGAGGTAGTGGAGACGCCGGATCGTTTGACTTCCCGAGCCTGAAGGAGGCCGTGAGCACCAAGCCCAAGAAGAAGAAGATGTCGCTCATGGAGTTCAACAACTCCGCCGGCAGCGGTGGTGGTGGCGGGGGATTCGCGAGGGAGCAGAGGGGCTTAACGCCAGACGAGATGCTCCGCCTCCCGACAGGGCCTAAGGAACGCTCCGCCGAGGAAATGCAGTACGGCCGCGGGTTTTCTAACTACGGAGGCGGCCGCTCTGTCCCGCCGCCTGGCCGAGGTCTGGACCGTAACGACGGCGACGGTTCCTGGGGCGGAGGGAGGAGATCCTATGGCGATTTCGATGAAGAGCGCAGGGGCGGTCCTCGTTCTAGGGTTTCGGATTTCGATCAACCTTCGAGAGCGGACGAGGTGGACAATTGGGCTTCGTTGAAGAAACCAGTTCCGGCATTCGATTCCGGTCGACAAAACCGGTACGGCTCTCTCGGCGGTGGCGGTGGCAGTAGTGGTGGCAATGGAGATGGCGGTGTTGGTGGTTCTAGGGCGGATGAGGTGGATAATTGGACGGCTGGTAAGAAGTCTCTTCCTGTTAGATCTTCCACGTTTGGTTCTGGTTTCCGCGATTCAGGTCCAGAGCCTGATCGCTGGACACGTGGCAAGCGTGACACACGTGACTTACGTGACAGCGATCGGGAGCGGCCGATATTGGTGCTGGACCCGCCGCAAGGCAACGGTTCCGTGAACGAAATGGAGGCAGTGGTGAAGACGAACAAGCCGAACCCTTTTGGCGCAGCGAGGCCAAGGGAGGAGGTTTTGGCGGAAAAGGGATTGGATTGGAAGAAGCTCGATTCGGAGATTGAATCGAAGAGGCCTGTAAGTGCACACTCCAGCAGGCCCTCCAGCGCGCAATCGAGTTGCTCCGAGGGGCCTGCCGGATTGCAGGTGAAGCCGAAGGTGAATCCCTTTGGGGATGCCAAGCCTAGGGAGGTTTTGCTGGAGGAGAAGGGAATGGATTGGAAGAAGATTGATCTTGAATTGGATCATCGCCGTTTTGATAGGTCTGTCATGCTGTTTTGTTTGTTTGTGCATGTTTTTGATAGTGATATTGTTTTGTTACCATTTGAGCGTTATGAATTTATGATGCATTGTTGCGATAACACTTGA 1257 0.5688 MSTRRSNIGAWAADAERAEEEEQEAAAAAAIAGGSGDAGSFDFPSLKEAVSTKPKKKKMSLMEFNNSAGSGGGGGGFAREQRGLTPDEMLRLPTGPKERSAEEMQYGRGFSNYGGGRSVPPPGRGLDRNDGDGSWGGGRRSYGDFDEERRGGPRSRVSDFDQPSRADEVDNWASLKKPVPAFDSGRQNRYGSLGGGGGSSGGNGDGGVGGSRADEVDNWTAGKKSLPVRSSTFGSGFRDSGPEPDRWTRGKRDTRDLRDSDRERPILVLDPPQGNGSVNEMEAVVKTNKPNPFGAARPREEVLAEKGLDWKKLDSEIESKRPVSAHSSRPSSAQSSCSEGPAGLQVKPKVNPFGDAKPREVLLEEKGMDWKKIDLELDHRRFDRSVMLFCLFVHVFDSDIVLLPFERYEFMMHCCDNT 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01057 418 Pfam Plant specific eukaryotic initiation factor 4B 1 385 IPR010433 GO:0003743
Arst10g01057 418 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 347 381 IPR010433 GO:0003743
Arst10g01057 418 MobiDBLite consensus disorder prediction 324 341 - -
Arst10g01057 418 MobiDBLite consensus disorder prediction 1 278 - -
Arst10g01057 418 MobiDBLite consensus disorder prediction 319 351 - -
Arst10g01057 418 MobiDBLite consensus disorder prediction 242 266 - -
Arst10g01057 418 MobiDBLite consensus disorder prediction 141 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01057 Arst-Chr10 10758750 10760552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g01057 43 384 Eukaryotic Initiation Factors Gene Family AT3G26400 54.178 1.61e-89 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01057 - - adu:107469131 735.332