Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01039 ATGAATCCGGAGGAGTCAGTCATGGGAGGGAAGAGTTCAAGAGAGTGTGTTGGTGGTGATCGGAGACATGTTTCTTCATCATATGGTGGTGGTGGTGGTTCTTCATCTTCATGGGATAACTATGGAGGGTACCCTAATCAGAGTCCATATCAAACACCTCAACACCACCATGCATCAGCTCCATATTATGACTATGCTTCTTCACAACCAAAGAGAAAGCTTGATAGGAGATATTCAAGGATTAATGATGATTACCGTTCACATGATGAGGTTACTGCTGCTCTTGCAAATGCTGGCCTGGAATCTTCTAATCTCATTGTTGGCATTGATTTCACAAAGAGCAATGAGTGGACAGGGAAGCGGTCATTCAATCGAAAATGTTTGCATCACATTGGAAATGGTTATAATCCCTATGAACAAGCTATCTCGATTATCGGGAAAACTTTATCCGTTTTCGACGAAGATAACTTGATTCCTTGTTATGGATTTGGAGATGCATCGACGCATGATCAAGATGTATTTAGTTTCCATTCAGACGAGAGGTTCTGCAATGGATTTGAGGAAGTTTTGGCACGATACAGACAAATTGTTCCGCGCCTCAAACTTGCAGGTCCTACTTCATTTGCCCCAATTATCGAGATGGCGATAACTATTGTTGAGCAAAGTGGTGGCCAGTATCATGTCTTGCTGATAATTGCAGATGGACAGGTGACCAGAAGTATTGACACCAAGCATGGACACTTGAGTCCACAAGAACAGAAGACAATAGATGCCATTGTAAAAGCCAGCGAGTATCCACTCTCAATAGTTTTGGTCGGAGTTGGAGATGGACCTTGGGATATGATGAGGGAATTCGATGATAACATCCCTACTAGATCATTCGACAATTTTCAGTTTGTGAATTTTACCGAAATAATGTCGAGGAGTGCGGATCCGACCAAAAGAGAGGCAGACTTTGCTCTGGCAGCTTTGATGGAGATACCTTCTCAATATAAGGCAACCCTGGAACTTGGCATCTTAGGTTCAAGGAGGGGACATTCACCAGACAGGGTTCCTCTACCCCCACCTCTTTATGAAAGGAATCCATCTAGCCTTAGCACGAGATCTTATCGGCCGGACAGTTTTCAGCAGAATACGCCTATGCATACTGGCTATGATAATAGAGTTAACGCAGAACAATCTTCAAGTCCTCTATATGATAACAAGGTTTGTCCAATTTGTCTCACCAATGCAAAGGATATGGCTTTTGGTTGCGGGCATCAGACTTGTTGCGAATGCGGTGTAAACCTCGAATTCTGCCCCATTTGCCGGAGCACAATCCAAACCAGGATAAGGCTTTACTAG 1344 0.4353 MNPEESVMGGKSSRECVGGDRRHVSSSYGGGGGSSSSWDNYGGYPNQSPYQTPQHHHASAPYYDYASSQPKRKLDRRYSRINDDYRSHDEVTAALANAGLESSNLIVGIDFTKSNEWTGKRSFNRKCLHHIGNGYNPYEQAISIIGKTLSVFDEDNLIPCYGFGDASTHDQDVFSFHSDERFCNGFEEVLARYRQIVPRLKLAGPTSFAPIIEMAITIVEQSGGQYHVLLIIADGQVTRSIDTKHGHLSPQEQKTIDAIVKASEYPLSIVLVGVGDGPWDMMREFDDNIPTRSFDNFQFVNFTEIMSRSADPTKREADFALAALMEIPSQYKATLELGILGSRRGHSPDRVPLPPPLYERNPSSLSTRSYRPDSFQQNTPMHTGYDNRVNAEQSSSPLYDNKVCPICLTNAKDMAFGCGHQTCCECGVNLEFCPICRSTIQTRIRLY 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01039 447 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 382 447 IPR013083 -
Arst10g01039 447 MobiDBLite consensus disorder prediction 28 55 - -
Arst10g01039 447 Pfam Copine 127 340 IPR010734 -
Arst10g01039 447 ProSiteProfiles Zinc finger RING-type profile. 404 437 IPR001841 -
Arst10g01039 447 SMART VWA_4 102 305 IPR002035 -
Arst10g01039 447 Pfam Zinc finger, C3HC4 type (RING finger) 401 442 - -
Arst10g01039 447 SUPERFAMILY RING/U-box 393 443 - -
Arst10g01039 447 SUPERFAMILY vWA-like 103 287 IPR036465 -
Arst10g01039 447 MobiDBLite consensus disorder prediction 1 73 - -
Arst10g01039 447 PANTHER COPINE FAMILY PROTEIN 1 49 424 - -
Arst10g01039 447 MobiDBLite consensus disorder prediction 344 392 - -
Arst10g01039 447 MobiDBLite consensus disorder prediction 360 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01039 Arst-Chr10 10452798 10457827 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01039 K16280 - gmx:100798816 719.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g05433 3 129045333 129049193 Arst10g01039 10 10452798 10457827 PCT