Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01019 ATGATATATTTTTTGAAACGAGTTAATCCGTATATATATTCCAAGAGAATAACACAAACACGCTATTATTTTGCAGAAGCAGTATGTTGGACAAGAAGTGCAGAAAGACAAAGTTGTCGCATGAGAATTGAATATCTTAAATCAGTTCTGAAACAAGATGTTGGCTTCTTTGACAAGCAAACCGATAGTGATTCTTCAAAGACCTTCCAAGTAATTTCTACCATAACTTCTGATGCCCAAACAATCCAAGACACCATGGCTGATAAGATACCGAACTGTCTAGTTCACCTGTCAGCATTTTTTTCTAGCTTCATAGTAGGACTCTTCCTCTCATGGAGGCTTGTAATAGCTGCATTTCCATTCTCAATAATGATGATCATGCCAGCAATCATATTTGGGAAGGCAATGAAAGATCTTGGGGAGAAAATGAAGGATGCATATGGCATAGCAGGGAGCATAGCGGAACAAGCTATCTCGTCGATTCGAACGGTTTATTCATATGTTGCCGAGAAAGAAACACTAAAGAGGTATAGCTCTGCTCTTGAAAGGAGTATGGAGCTGGGAATAAAGCTAGGGAGAACAAAGGGTGTTGTAGTTGGTAGCTTTGGGTTGCTTTATGCTACTTGGGCATTTCAATCTTGGGTTGGAAGTGTTGTGGTTAGGACTAAAGGTGAAAGAGGTGGACTTGTGTTTGCTGCTCAAATTTGCATGATTTGGGGAGGACTGTCTCTGATGAATGCACTTCCAAATCTAACTTTCATTGTAGAGGCAAAAGTAGCAACAACCAGAATTTTCCAAATGATTGAGCAAATACCAATCATAAACTCTCACAAACAAAAAGGAAGGATCTTAAGCCATGTGAGAGGAGAAATCACATTCACAAAAATTGACTTCACTTACCCACCACGACCGGACACACCGATTCTCCAAGGACTGGATCTGAAGTTTCCAGCATGTAAAACAATAGGCCTAGTTGGAGGCAGTGGTTCTGGAAAATCCACAATCATCTCTTTGATTGAAAGATTCTATGATCCTTTATATGGTGAGATATTGCTTGATGGACATGATATAAAGAGGCTTGAGCTTAAGTGGCTAAGGTCACAAATGGGACTTGTTAATCAGGAGCCTATTCTGTTTGCAACATCAATTAGGGAGAATATTCTGTTTGGCAAGGAAGGTGCTTCAATGGAAGCTGTTATAAATGCAGCTAAGGCTGCAAATGCACATGGTTTCATTGTTAAACTTCCTAGTGGATATGAAACTCAAGTGGGACAACTTGGGACTCAGTTATCTGGAGGACAAAAGCAAAGAATTGCAATAGCAAGGGCCCTAATTCGCAACCCGAAAATCCTACTCCTTGATGAAGCCACAAGTGCATTGGATTCAGAGTCTGAAAGAATAGTGCAAGAGGCCCTTGATTTGGCTTCAAGAGGCAGAACAACAATCATTGTAGCTCATCGCATATCGACGATTCGAAATGCTGACTCGATAGTAGTCCTTCAATCAGGAAGAGTTGTTGAATCTGGCTCCCATGTTGAGCTACTCAAACTTAACAATGGACAAGGGGGTGCTTATAGCAAAATGCTAAAACTACAACAAACAAATCAAAATGAAGATTCAACATTGAATGATGTGAGCAAGAGTCCCCAAGTTATGTCATATTTAACAAGTCCAAGATCAATGCCAGTTACTCCAACTCATCATTCATTCACCTCACCGACACCAATATACTCAATCAGTGTTCTGGGGTCCCCTTTTGATGACTACTCTGAGAATTCTGAGATTTCTTCAAAAGCAAGTTTCTCGCAATGGCGTTTGATAAGAATGAATTCCCCTGAGTGGAAGTATGCTCTGATAGGATGCTTAGGTGCTATTGGCTCTGGAATTTGCCAACCTTTTTACTCTTATTGCCTTGGATTCATTGCTTCTATCTACTTTATAACCGATCACTCGCGCATCGTCTCACAAATCAGGCTGTACTCATCAATTTTCTGCATCATAGCAGTTGTCAACTTCATATCAGGCCTAATTCAGCACTCGAGCTTCGCCATCATGGGCGAGAAATTGCTAAAGAGGGTGCGCGAGAATCTGCTAGAGAAAATCCTTACATTTGAAATAGGATGGTTTGATCAAGAAGATAACACCAGTGCAGCCATCTGCGCTCATTTGGCGTTCGATGCAAACTTGGTCAGGTCTCTTGTAGCAGAAAGAATGTCATTACTAGTTCAAGTATTTGTCACTGCCACCCTGGCTTTCGCACTCGGTTTATATGTCTCATGGAAGGTGGCAATGGTAATGATAGCTATGCAGCCCTTGATCATTGCTTGTTTCTATTCCAAATTCATGCTTATGAAAAGTATGTCAGGTAAAGCAAGAAAGGCTCAAAGTGAAGGTAGTCAATTAGCAATGGAAGCTACCATTAACCATATAACTATTGCTGCATTTTCATCAGAGAAAAGGGTATTGAATTTGTTCAAAAATTCAATGAAAGGACCTCATTTGGAAACCGTAAAGCAATCATGGATTTCAGCTGCAATTTTGTCATTGTCACAGTTCATAACTACAGCTTCTATAACCTTAACATTTTGGTATGGAGGATTGCTGCTAAACAAAAAGATGGTGAATTCAAATGACCTTTTGCAAGTTTTCTTAATACTGATGGGAACTGGAAGACAAATTGCTGAGACAGTAAGCATGACTTCGGACATAGCGAAAAGCGGGAAAGCCGTTAGCTCGATTTTTGCAATTTTGGACAGGAAAACTCAGATTGAACCTGAAGATCTTAGGCTTATGAAGTTCAGAAAGAACAACAACATAAAGGGTCATGTGAAGTTAAAAGATGTGTTCTTTTCATACCCATCAAGGCCAGAACAAATGATCCTAAAGGGTCTTAGTCTTGAAATTGAAGCTGGGAAAACAATTGCATTGGTGGGACAAAGTGGGTCAGGGAAATCCACTATCATTGGACTAATTGAAAGATTTTATGACCCAATTAATGGATCAATATTTATAGATGGTTGTGACATTAGGGAATTTGATTTGAGAAGTTTGAGGTTACATATTGCATTGGTGAGTCAAGAGCCTACACTCTTTGGTGGAACTATACGTGATAACATTGTGTATGGAAAGATTGATGCATCTGAAGATGAAATAAGAAAGGCAGTGCGTCTTGCAAATGCTCATGAGTTTATAAGTTCAATGAGAGATGGATATGACACATACTGTGGAGAAAGAGGAGTGCAGCTTTCAGGGGGACAAAAGCAAAGAATTGCAATTGCCAGAGCAATACTAAAGAACCCATCAATCCTTCTCATGGACGAAGCAACAAGTGCTCTCGACAGCGTTTCAGAGAATCTAGTGCAAGATTCCCTGGAGAAAATGATGGTTGGAAGAACATGTGTGGTTATTGCTCATCGTTTGTCTACAATTCAGAATGTGGACACCATTGCTGTGATCAAGAATGGGAAATTGGTGGAGCAAGGTTCACACTCCGAGTTAATGAATGTTGGAACAAAGGGTGCTTACTACTCCATGATTAGGTTACAACATGGGACTAACTCTACTAGCTGA 3570 0.4011 MIYFLKRVNPYIYSKRITQTRYYFAEAVCWTRSAERQSCRMRIEYLKSVLKQDVGFFDKQTDSDSSKTFQVISTITSDAQTIQDTMADKIPNCLVHLSAFFSSFIVGLFLSWRLVIAAFPFSIMMIMPAIIFGKAMKDLGEKMKDAYGIAGSIAEQAISSIRTVYSYVAEKETLKRYSSALERSMELGIKLGRTKGVVVGSFGLLYATWAFQSWVGSVVVRTKGERGGLVFAAQICMIWGGLSLMNALPNLTFIVEAKVATTRIFQMIEQIPIINSHKQKGRILSHVRGEITFTKIDFTYPPRPDTPILQGLDLKFPACKTIGLVGGSGSGKSTIISLIERFYDPLYGEILLDGHDIKRLELKWLRSQMGLVNQEPILFATSIRENILFGKEGASMEAVINAAKAANAHGFIVKLPSGYETQVGQLGTQLSGGQKQRIAIARALIRNPKILLLDEATSALDSESERIVQEALDLASRGRTTIIVAHRISTIRNADSIVVLQSGRVVESGSHVELLKLNNGQGGAYSKMLKLQQTNQNEDSTLNDVSKSPQVMSYLTSPRSMPVTPTHHSFTSPTPIYSISVLGSPFDDYSENSEISSKASFSQWRLIRMNSPEWKYALIGCLGAIGSGICQPFYSYCLGFIASIYFITDHSRIVSQIRLYSSIFCIIAVVNFISGLIQHSSFAIMGEKLLKRVRENLLEKILTFEIGWFDQEDNTSAAICAHLAFDANLVRSLVAERMSLLVQVFVTATLAFALGLYVSWKVAMVMIAMQPLIIACFYSKFMLMKSMSGKARKAQSEGSQLAMEATINHITIAAFSSEKRVLNLFKNSMKGPHLETVKQSWISAAILSLSQFITTASITLTFWYGGLLLNKKMVNSNDLLQVFLILMGTGRQIAETVSMTSDIAKSGKAVSSIFAILDRKTQIEPEDLRLMKFRKNNNIKGHVKLKDVFFSYPSRPEQMILKGLSLEIEAGKTIALVGQSGSGKSTIIGLIERFYDPINGSIFIDGCDIREFDLRSLRLHIALVSQEPTLFGGTIRDNIVYGKIDASEDEIRKAVRLANAHEFISSMRDGYDTYCGERGVQLSGGQKQRIAIARAILKNPSILLMDEATSALDSVSENLVQDSLEKMMVGRTCVVIAHRLSTIQNVDTIAVIKNGKLVEQGSHSELMNVGTKGAYYSMIRLQHGTNSTS 1189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01019 1189 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 23 256 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst10g01019 1189 SUPERFAMILY ABC transporter transmembrane region 605 924 IPR036640 GO:0005524|GO:0016020
Arst10g01019 1189 SMART AAA_5 318 504 IPR003593 GO:0016887
Arst10g01019 1189 SMART AAA_5 970 1156 IPR003593 GO:0016887
Arst10g01019 1189 FunFam ABC transporter B family member 4 933 1187 - -
Arst10g01019 1189 SUPERFAMILY ABC transporter transmembrane region 22 270 IPR036640 GO:0005524|GO:0016020
Arst10g01019 1189 Gene3D - 281 533 IPR027417 -
Arst10g01019 1189 FunFam ABC transporter B family member 4 281 539 - -
Arst10g01019 1189 ProSitePatterns ABC transporters family signature. 1082 1096 IPR017871 GO:0005524|GO:0016887
Arst10g01019 1189 CDD ABC_6TM_Pgp_ABCB1_D1_like 24 264 - -
Arst10g01019 1189 Pfam ABC transporter 961 1110 IPR003439 GO:0005524
Arst10g01019 1189 ProSitePatterns ABC transporters family signature. 430 444 IPR017871 GO:0005524|GO:0016887
Arst10g01019 1189 CDD ABC_MTABC3_MDL1_MDL2 943 1182 - -
Arst10g01019 1189 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 282 532 IPR027417 -
Arst10g01019 1189 Pfam ABC transporter 309 458 IPR003439 GO:0005524
Arst10g01019 1189 Pfam ABC transporter transmembrane region 618 886 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst10g01019 1189 Pfam ABC transporter transmembrane region 22 222 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst10g01019 1189 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 618 905 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst10g01019 1189 CDD ABC_MTABC3_MDL1_MDL2 291 532 - -
Arst10g01019 1189 CDD ABC_6TM_Pgp_ABCB1_D2_like 607 923 - -
Arst10g01019 1189 Gene3D ABC transporter type 1, transmembrane domain 20 909 IPR036640 GO:0005524|GO:0016020
Arst10g01019 1189 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 291 527 IPR003439 GO:0005524
Arst10g01019 1189 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 943 1179 IPR003439 GO:0005524
Arst10g01019 1189 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 937 1182 IPR027417 -
Arst10g01019 1189 PANTHER ABC TRANSPORTER B FAMILY 21 631 IPR039421 -
Arst10g01019 1189 PANTHER ABC TRANSPORTER B FAMILY 21 631 IPR039421 -
Arst10g01019 1189 Gene3D - 929 1187 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01019 Arst-Chr10 10113194 10121561 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g01019 619 1189 Calmodulin-binding Proteins AT2G36910 37.326 4.89e-111 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01019 K05658 - gmx:100804664 1782.3