Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00974 ATGGAGTTTCTTGATTTCTTCATGGTGGCAACAAGTACCATAGGCTTCATCTTAGTATGCAAAAATGTCTTGTATTTTGTGAAGTGGGTATGGGGAATGTTCTTAAGGGCTCCAAAGAATCTAAGAGACTATGGTTCATGGGCCATGATCACTGGATCCACCGATGGAATTGGCAAAGCCATGGCACATGAATTGGCATCTAAGGGTCTCAACCTTCTCTTGGTTAGTAGAAACCCTAAAAAGCTTGAGGCCACATCTAATGAAATAAGAGACAAAAATAGTGGCAATGTTGAAATAAAATGTTTGGTAATTGATTTTGCAAAAGAAAATGGAGAGGAAATTATGAAAAGGGTTGAGGAAGCAATTGAGGGTTTGGATGTGGGTATTCTTGTAAATTGTGCTGGGTGGACACATGCTTATGCTAGGTACTTTCATGAGGTTGATTATGAGATGATAGATGGTACCATAAAAGTTAATGTGGAAGGAACAATTTGGGTCACAAAGGCAGTGATTCCTAGTATGATCAAGAAGAAGAAAGGAGCAATCATAAACCTTGGATCTGGTTCTACTTTTGTTCTTCCATCATATCCCTTGTTTACCGTCTATGCTGCTACTAAACGATCTGTGGAAATGTTCTCGAGATGCATTAACTTGGAATACAAGCATAAAGGAATTGACATCCAGTGTCAGGTTCCATTATATGTGTCAACAAAGTTAACAAAGTTGGAAACTTCAGTGTTTGTTCCAACGCCAGAGAAGTATATAAAATCATGCACAAGATGGATTGGGTATGAAACTGTGGTGGTGCCTTACTTGCTACATTCTCTTCAGGCATTTACAGTAAGGGCAATTCCTGAGACATTTGTTGATTCCTATATGCTGCGTTACTTTCTCTATGGGCGCAAAAAAGGACTCTTCAAAGACGCTAAAATTAAAGCATTGGAAGCATCCAAGTCCTAA 960 0.3896 MEFLDFFMVATSTIGFILVCKNVLYFVKWVWGMFLRAPKNLRDYGSWAMITGSTDGIGKAMAHELASKGLNLLLVSRNPKKLEATSNEIRDKNSGNVEIKCLVIDFAKENGEEIMKRVEEAIEGLDVGILVNCAGWTHAYARYFHEVDYEMIDGTIKVNVEGTIWVTKAVIPSMIKKKKGAIINLGSGSTFVLPSYPLFTVYAATKRSVEMFSRCINLEYKHKGIDIQCQVPLYVSTKLTKLETSVFVPTPEKYIKSCTRWIGYETVVVPYLLHSLQAFTVRAIPETFVDSYMLRYFLYGRKKGLFKDAKIKALEASKS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00974 319 Pfam short chain dehydrogenase 47 241 IPR002347 -
Arst10g00974 319 Gene3D - 42 271 - -
Arst10g00974 319 PRINTS Glucose/ribitol dehydrogenase family signature 174 190 IPR002347 -
Arst10g00974 319 PRINTS Glucose/ribitol dehydrogenase family signature 223 240 IPR002347 -
Arst10g00974 319 PRINTS Glucose/ribitol dehydrogenase family signature 125 136 IPR002347 -
Arst10g00974 319 PRINTS Glucose/ribitol dehydrogenase family signature 47 64 IPR002347 -
Arst10g00974 319 PRINTS Glucose/ribitol dehydrogenase family signature 202 221 IPR002347 -
Arst10g00974 319 PIRSF 11-beta-HSD1 1 307 - -
Arst10g00974 319 PANTHER RH59310P 4 310 - -
Arst10g00974 319 FunFam Hydroxysteroid (17-beta) dehydrogenase 3 41 269 - -
Arst10g00974 319 CDD 17beta-HSD1_like_SDR_c 45 287 - -
Arst10g00974 319 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 45 265 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00974 Arst-Chr10 9402349 9408156 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00974 14 309 Lipid Metabolism Gene Families AT1G67730 52.189 2.54e-108 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00974 K10251 - gmx:100816067 456.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g00974 10 9402349 9408156 Arst10g00974 10 9402349 9408156 ECH
Arst3g05370 3 128638999 128641017 Arst10g00974 10 9402349 9408156 PCT